RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 C3orf30Q96M34 536 aa16.39■□□□□ 0.21
VARS-215ENST00000375663 LHPPQ9H008 270 aa16.39■□□□□ 0.21
VARS-215ENST00000375663 AGPAT4Q9NRZ5 378 aa16.39■□□□□ 0.21
VARS-215ENST00000375663 BTN3A3O00478 584 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 MTX2O75431 263 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 GSTM2P28161 218 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 MTAPQ13126 283 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 SCARB2Q14108 478 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 CRTC2Q53ET0 693 aaPredicted RBP16.38■□□□□ 0.21
VARS-215ENST00000375663 LRRC70Q7Z2Q7 622 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ABHD11Q8NFV4 315 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 SUSD6Q92537 303 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ART5Q96L15 291 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 GFM1Q96RP9 751 aaKnown RBP16.38■□□□□ 0.21
VARS-215ENST00000375663 AIF1LQ9BQI0 150 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ZNF510Q9Y2H8 683 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 SLC1A7O00341 560 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ELNP15502 786 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 HNMTP50135 292 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 HTR6P50406 440 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 RORCP51449 518 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 DGKEP52429 567 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 CD47Q08722 323 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 C9orf64Q5T6V5 341 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ZNF697Q5TEC3 545 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 LCN1P1Q5VSP4 162 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 PSAPL1Q6NUJ1 521 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ENPP6Q6UWR7 440 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ZNF730Q6ZMV8 503 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 MMP27Q9H306 513 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
VARS-215ENST00000375663 DKK3Q9UBP4 350 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ZBTB42B2RXF5 422 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 TPST2O60704 377 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 PRSS56P0CW18 603 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 AP1S2P56377 157 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 HSPB3Q12988 150 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 GRM2Q14416 872 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ABRAXAS2Q15018 415 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 CXorf40AQ8TE69 158 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ACDQ96AP0 544 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 CRELD1Q96HD1 420 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 B4GAT1O43505 415 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 KDELR3O43731 214 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 SLC35G4P0C7Q5 338 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ATP12AP54707 1039 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 RPS3AP61247 264 aaKnown RBP16.38■□□□□ 0.21
VARS-215ENST00000375663 ZBTB6Q15916 424 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 LSMEM2Q8N112 164 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 DTWD1Q8N5C7 304 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 FUBP1Q96AE4 644 aaKnown RBP16.38■□□□□ 0.21
VARS-215ENST00000375663 HERC2P3Q9BVR0 1158 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 ANKRA2Q9H9E1 313 aa16.38■□□□□ 0.21
VARS-215ENST00000375663 SAP18O00422 153 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 BCKDHAP12694 445 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 MAPK9P45984 424 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 GRB14Q14449 540 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 TSTQ16762 297 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 C11orf91Q3C1V1 193 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 CXXC5Q7LFL8 322 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 TMEM102Q8N9M5 508 aaPredicted RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 SLC38A4Q969I6 547 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 RHBGQ9H310 441 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 MALT1Q9UDY8 824 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 A0A1W2PRB8 838 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 SEPT4O43236 478 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 GABRB3P28472 473 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 RELAQ04206 551 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 TARDBPQ13148 414 aaKnown RBP eCLIP16.37■□□□□ 0.215e-8■■■■■ 29.8
VARS-215ENST00000375663 TUBA3EQ6PEY2 450 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 DBF4BQ8NFT6 615 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 SHKBP1Q8TBC3 707 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 PPP1R16AQ96I34 528 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 SLC30A3Q99726 388 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 SLC35A5Q9BS91 424 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 EQTNQ9NQ60 294 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 COMMD3Q9UBI1 195 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 PCTPQ9UKL6 214 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 MKLN1Q9UL63 735 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 RPL36Q9Y3U8 105 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 ZNF26P17031 533 aaPredicted RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 PHC1P78364 1004 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 TRIM71Q2Q1W2 868 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 C5orf22Q49AR2 442 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 KHSRPQ92945 711 aaKnown RBP eCLIP16.37■□□□□ 0.21
VARS-215ENST00000375663 C11orf24Q96F05 449 aaPredicted RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 CCDC3Q9BQI4 270 aa16.37■□□□□ 0.21
VARS-215ENST00000375663 CCDC177Q9NQR7 707 aaPredicted RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 FAM120CQ9NX05 1096 aaKnown RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 HEMK1Q9Y5R4 338 aaPredicted RBP16.37■□□□□ 0.21
VARS-215ENST00000375663 CLCN4P51793 760 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 PLA2G16P53816 162 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 TMEM220Q6QAJ8 160 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms