RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RAB15P59190 212 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 DCDC1P59894 354 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 PTSQ03393 145 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 DMC1Q14565 340 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 GPR107Q5VW38 600 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 DNAJC14Q6Y2X3 702 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 PGBD3Q8N328 593 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 MRPL43Q8N983 215 aaKnown RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 PYURFQ96I23 114 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 HHIPQ96QV1 700 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 TBCDQ9BTW9 1192 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 IKZF5Q9H5V7 419 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SOX17Q9H6I2 414 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 LIN28AQ9H9Z2 209 aaKnown RBP13.55□□□□□ -0.24
HMGCL-203ENST00000374490 SERHLQ9NQF3 203 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 ASAH2Q9NR71 780 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 AP1M2Q9Y6Q5 423 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 XIRP2A4UGR9 3374 aa13.55□□□□□ -0.24
HMGCL-203ENST00000374490 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
HMGCL-203ENST00000374490 DENND4CQ5VZ89 1909 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MTCL1Q9Y4B5 1905 aaKnown RBP13.54□□□□□ -0.24
HMGCL-203ENST00000374490 HIDE1A8MVS5 230 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 GFYI3L273 518 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 LEFTY2O00292 366 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 GPR37L1O60883 481 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 E2F6O75461 281 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 SEC14L2O76054 403 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 SERPINA1P01009 418 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 FTH1P02794 183 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 ITGAMP11215 1152 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 TCF3P15923 654 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 AMD1P17707 334 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 CRHBPP24387 322 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 DCTP40126 519 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MAGEA2P43356 314 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MAPK9P45984 424 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 C21orf58P58505 322 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MTAPQ13126 283 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 NKG7Q16617 165 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 PUS10Q3MIT2 529 aaKnown RBP13.54□□□□□ -0.24
HMGCL-203ENST00000374490 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 LIPJQ5W064 366 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 SPESP1Q6UW49 350 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MBOAT1Q6ZNC8 495 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 TMC8Q8IU68 726 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 GJD3Q8N144 294 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 FAM86B1Q8N7N1 296 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 SETD9Q8NE22 299 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 RAB2BQ8WUD1 216 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 ATL1Q8WXF7 558 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 MBOAT4Q96T53 435 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
HMGCL-203ENST00000374490 RPS6KA6Q9UK32 745 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 DLGAP4Q9Y2H0 992 aa13.54□□□□□ -0.24
HMGCL-203ENST00000374490 WASH3PC4AMC7 463 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RFXANKO14593 260 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 AREL1O15033 823 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SLC16A6O15403 523 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RB1P06400 928 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 HSD3B1P14060 373 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SDC1P18827 310 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 LHCGRP22888 699 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 HSD3B2P26439 372 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ELK4P28324 431 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RYKP34925 604 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 NEDD8Q15843 81 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 DUOXA1Q1HG43 343 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 PTCHD3Q3KNS1 767 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 GTDC1Q4AE62 458 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 GAREM2Q75VX8 874 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RTL10Q7L3V2 364 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 KLHDC8AQ8IYD2 350 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 TTC16Q8NEE8 873 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 BORCS5Q969J3 196 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CORO1BQ9BR76 489 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 FANCEQ9HB96 536 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 B4GALT6Q9UBX8 382 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SNX5Q9Y5X3 404 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms