RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 MMP17Q9ULZ9 603 aa16.34■□□□□ 0.21
PTPN20-203ENST00000374342 SHISA7A6NL88 538 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 H3BNX3 289 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SCAMP1O15126 338 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 NPPBP16860 134 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 YBX1P67809 324 aaKnown RBP16.33■□□□□ 0.21
PTPN20-203ENST00000374342 PCDH1Q08174 1060 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SFSWAPQ12872 951 aaKnown RBP16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SLBPQ14493 270 aaKnown RBP eCLIP16.33■□□□□ 0.21
PTPN20-203ENST00000374342 PRAMEF14Q5SWL7 426 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 CATSPEREQ5SY80 951 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 PRAMEF13Q5VWM6 474 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SLC15A3Q8IY34 581 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 FLCNQ8NFG4 579 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 HMGB4Q8WW32 186 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SLC13A3Q8WWT9 602 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 TSSK3Q96PN8 268 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 TIMM29Q9BSF4 260 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 EBPLQ9BY08 206 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 TRIT1Q9H3H1 467 aaKnown RBP16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SLAMF8Q9P0V8 285 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SUFUQ9UMX1 484 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 SLC17A4Q9Y2C5 497 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 TMED5Q9Y3A6 229 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 PLEKHM1Q9Y4G2 1056 aa16.33■□□□□ 0.21
PTPN20-203ENST00000374342 TRIOBPQ9H2D6 2365 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 KLHL33A6NCF5 533 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 PRPS2P11908 318 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 AMD1P17707 334 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 GABRG2P18507 467 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 SDC1P18827 310 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 ACSL1P33121 698 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 GCKP35557 465 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 TPMTP51580 245 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 CLDN2P57739 230 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 PLIN5Q00G26 463 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 ZNF33BQ06732 778 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 DMPKQ09013 629 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 MUM1Q2TAK8 710 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 RABL3Q5HYI8 236 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 SPANXN4Q5MJ08 99 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 MED27Q6P2C8 311 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 DPP10Q8N608 796 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 GLB1L3Q8NCI6 653 aaPredicted RBP16.33■□□□□ 0.2
PTPN20-203ENST00000374342 OR7G3Q8NG95 312 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 TMEM125Q96AQ2 219 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 NRTNQ99748 197 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 CLMPQ9H6B4 373 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 RMI1Q9H9A7 625 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.2
PTPN20-203ENST00000374342 ACSL5Q9ULC5 683 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 CA5BQ9Y2D0 317 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 WDR37Q9Y2I8 494 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 GPSM3Q9Y4H4 160 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 PCDHGA11Q9Y5H2 935 aa16.33■□□□□ 0.2
PTPN20-203ENST00000374342 NPIPB8E9PQR5 432 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 NVLO15381 856 aaKnown RBP16.32■□□□□ 0.2
PTPN20-203ENST00000374342 DNAJA2O60884 412 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 SH3BGRLO75368 114 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 GLULP15104 373 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 TACR1P25103 407 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 ATG9BQ674R7 924 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 KIAA2013Q8IYS2 634 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 MSANTD3Q96H12 275 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 C12orf66Q96MD2 445 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 EFCAB11Q9BUY7 163 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 FGF22Q9HCT0 170 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 VPS29Q9UBQ0 182 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 PCDHA9Q9Y5H5 950 aa16.32■□□□□ 0.2
PTPN20-203ENST00000374342 PIPSLA2A3N6 862 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 POM121BA6NF01 834 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 MAGEB17A8MXT2 336 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 STAMBPO95630 424 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 HSD3B1P14060 373 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 HSD3B2P26439 372 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 MEF2AQ02078 507 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-203ENST00000374342 TRAP1Q12931 704 aaKnown RBP16.31■□□□□ 0.2
PTPN20-203ENST00000374342 E2F2Q14209 437 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 PYCR3Q53H96 274 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 NOXRED1Q6NXP6 359 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 CYP2R1Q6VVX0 501 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 RNF111Q6ZNA4 994 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 Q6ZS52 159 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 HUS1BQ8NHY5 278 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 REPS1Q96D71 796 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 PPM1MQ96MI6 270 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 TMEM74Q96NL1 305 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 BTBD1Q9H0C5 482 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 BRF2Q9HAW0 419 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 C15orf38-AP3S2A0A0A6YYH1 394 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 H0Y8X5 98 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 PI15O43692 258 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 LRATO95237 230 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 ETHE1O95571 254 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 PGRP06401 933 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 C1GALT1C1LP0DN25 315 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 CDH1P12830 882 aa16.31■□□□□ 0.2
PTPN20-203ENST00000374342 HSD17B1P14061 328 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms