RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 WDFY2Q96P53 400 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 TSGA13Q96PP4 275 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 PARK7Q99497 189 aaKnown RBP12.58□□□□□ -0.4
PRPF4-201ENST00000374198 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.4
PRPF4-201ENST00000374198 BARHL1Q9BZE3 327 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 HEBP1Q9NRV9 189 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 KIF17Q9P2E2 1029 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 SPASTQ9UBP0 616 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF225Q9UK10 706 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 ABCG2Q9UNQ0 655 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 PCDHGA6Q9Y5G7 932 aa12.58□□□□□ -0.4
PRPF4-201ENST00000374198 I6L893 689 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 SEC14L5O43304 696 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 VPS26AO75436 327 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 S1PR4O95977 384 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CSF3P09919 207 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 DNAJA1P31689 397 aaKnown RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CPT1AP50416 773 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CYP4F2P78329 520 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 DBPQ10586 325 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 IKZF1Q13422 519 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 RIN1Q13671 783 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 UBE2J2Q8N2K1 259 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 ATG16L2Q8NAA4 619 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 NPLOC4Q8TAT6 608 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 WNT8BQ93098 351 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 TESCQ96BS2 214 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 RGS18Q9NS28 235 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF224Q9NZL3 707 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 ATP6V1HQ9UI12 483 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 UBA6A0AVT1 1052 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 SUPT3HB4E1H0 165 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 E9PQ18 207 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 AGRPO00253 132 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 HCRTO43612 131 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 PMPCBO75439 489 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 WDR47O94967 919 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 VIPP01282 170 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 FPR1P21462 350 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 KCNQ1P51787 676 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 BACE1P56817 501 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 PSPHP78330 225 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 SP3Q02447 781 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 MAB21L1Q13394 359 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 GLYR1Q49A26 553 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 Q6ZSR9 355 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 KRT73Q86Y46 540 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 FBXO39Q8N4B4 442 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 TTLQ8NG68 377 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 POP5Q969H6 163 aaKnown RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CRELD1Q96HD1 420 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 HYLS1Q96M11 299 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF578Q96N58 590 aaPredicted RBP12.57□□□□□ -0.4
PRPF4-201ENST00000374198 FSD1LQ9BXM9 530 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 PPA2Q9H2U2 334 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 SPNS1Q9H2V7 528 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 GLOD4Q9HC38 313 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 U3KQ87 197 aa12.57□□□□□ -0.4
PRPF4-201ENST00000374198 PHIPQ8WWQ0 1821 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 IFNA16P05015 189 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 FDXRP22570 491 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 RPS3P23396 243 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 RPS19P39019 145 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 CBX5P45973 191 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 STAT5BP51692 787 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GEMP55040 296 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 CACHD1Q5VU97 1274 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 SAXO2Q658L1 398 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TYW3Q6IPR3 259 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 PLET1Q6UQ28 207 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 CTU1Q7Z7A3 348 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 MSRB3Q8IXL7 192 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ANKRD53Q8N9V6 530 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ZNF680Q8NEM1 530 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 SLC13A3Q8WWT9 602 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 HRASLS5Q96KN8 279 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TMEM245Q9H330 911 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TFB2MQ9H5Q4 396 aaKnown RBP12.56□□□□□ -0.4
PRPF4-201ENST00000374198 MINDY3Q9H8M7 445 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 SLC25A37Q9NYZ2 338 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
PRPF4-201ENST00000374198 ARVCFO00192 962 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms