RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CNDP2Q96KP4 475 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SMIM14Q96QK8 99 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 P2RY13Q9BPV8 354 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 THUMPD3Q9BV44 507 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SGPP1Q9BX95 441 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ACPTQ9BZG2 426 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SMG9Q9H0W8 520 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PCDHAC1Q9H158 963 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ACTL8Q9H568 366 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 KAT8Q9H7Z6 458 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 CLK4Q9HAZ1 481 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TRPV5Q9NQA5 729 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 ACSS2Q9NR19 701 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 DDX18Q9NVP1 670 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 THUMPD1Q9NXG2 353 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 LMCD1Q9NZU5 365 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 DNAJB9Q9UBS3 223 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 MSRAQ9UJ68 235 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 TMPRSS11EQ9UL52 423 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC22A14Q9Y267 594 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 INVSQ9Y283 1065 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 MYRFQ9Y2G1 1151 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 POLR3HQ9Y535 204 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 PTPRSQ13332 1948 aa8.46□□□□□ -1.06
SNRNP40-202ENST00000373720 HTTP42858 3142 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PLXNA2O75051 1894 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 A0A087WXM4 84 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 TRBV5-3A0A0A0MS03 114 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 A0A1B0GTL3 188 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 DPPA5A6NC42 116 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 HEPACAM2A8MVW5 462 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 C3orf80F5H4A9 247 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CACNB4O00305 520 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 RNASET2O00584 256 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 RFXANKO14593 260 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 KMOO15229 486 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 INPP4BO15327 924 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CLOCKO15516 846 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 AHCYL1O43865 530 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 MRPS14O60783 128 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 H6PDO95479 791 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 C1orf105O95561 183 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FESP07332 822 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CTSLP07711 333 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 C1GALT1C1LP0DN25 315 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 GPX2P18283 190 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ITGB6P18564 788 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 MYF6P23409 242 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CALRP27797 417 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 IL12AP29459 219 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ESRRGP62508 458 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CYP2A13Q16696 494 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 DUOXA1Q1HG43 343 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM174BQ3ZCQ3 159 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 XKR6Q5GH73 641 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 NHSL2Q5HYW2 709 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ATAT1Q5SQI0 421 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 SDE2Q6IQ49 451 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 KIAA1161Q6NSJ0 714 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CES5AQ6NT32 575 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 LAYNQ6UX15 382 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PAGE2Q7Z2X7 111 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CARM1Q86X55 608 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CALHM3Q86XJ0 350 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 DCUN1D3Q8IWE4 304 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ZC3H7AQ8IWR0 971 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 MICU2Q8IYU8 434 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 TBC1D19Q8N5T2 526 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 METTL25Q8N6Q8 603 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 RNF148Q8N7C7 305 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PNPLA1Q8N8W4 532 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 TTC16Q8NEE8 873 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 GOT1L1Q8NHS2 421 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 LRTOMTQ8WZ04 291 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 NELL1Q92832 810 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FGF13Q92913 245 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 GFM2Q969S9 779 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM131CQ96AQ9 280 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 SLCO4A1Q96BD0 722 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 BIRC7Q96CA5 298 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 COQ8BQ96D53 544 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 MSANTD3Q96H12 275 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 COX14Q96I36 57 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 RIPOR3Q96MK2 946 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ZSWIM3Q96MP5 696 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF583Q96ND8 569 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM74Q96NL1 305 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CDK15Q96Q40 435 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM129BQ96TA1 746 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 RSPH9Q9H1X1 276 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 COQ10BQ9H8M1 238 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PELI2Q9HAT8 420 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 SMPD3Q9NY59 655 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 USE1Q9NZ43 259 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms