RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 GPR78Q96P69 363 aa17.86■□□□□ 0.45
CDX4-201ENST00000373514 FAM111AQ96PZ2 611 aa17.86■□□□□ 0.45
CDX4-201ENST00000373514 TRAPPC9Q96Q05 1148 aa17.86■□□□□ 0.45
CDX4-201ENST00000373514 PAIP2Q9BPZ3 127 aaKnown RBP17.86■□□□□ 0.45
CDX4-201ENST00000373514 NMRAL1Q9HBL8 299 aa17.86■□□□□ 0.45
CDX4-201ENST00000373514 SIDT1Q9NXL6 827 aaKnown RBP17.86■□□□□ 0.45
CDX4-201ENST00000373514 DCDC2Q9UHG0 476 aa17.86■□□□□ 0.45
CDX4-201ENST00000373514 A0A0J9YY10 115 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 TMX2-CTNND1H3BSU7 103 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 PLD2O14939 933 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 EBLN1P0CF75 366 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 MAGP20916 626 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 CSTF2P33240 577 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDX4-201ENST00000373514 AP1S2P56377 157 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 TGFBIQ15582 683 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 ZIC1Q15915 447 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SLC5A12Q1EHB4 618 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 KIAA1614Q5VZ46 1190 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 FBXO39Q8N4B4 442 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 AGBL5Q8NDL9 886 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SMPDL3AQ92484 453 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 FBXL8Q96CD0 374 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SLC41A2Q96JW4 573 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 ATOH8Q96SQ7 321 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 EGFL8Q99944 293 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SLC6A20Q9NP91 592 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 C1GALT1Q9NS00 363 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SOHLH2Q9NX45 425 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SEMA5BQ9P283 1151 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 RNF112Q9ULX5 631 aa17.85■□□□□ 0.45
CDX4-201ENST00000373514 SDK2Q58EX2 2172 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 TRABD2BA6NFA1 517 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 UBXN8O00124 270 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 TOX3O15405 576 aaPredicted RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 FGF3P11487 239 aaPredicted RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 NELFEP18615 380 aaKnown RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 LSP1P33241 339 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 SLC26A3P40879 764 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 ETV4P43268 484 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 MAPK10P53779 464 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 NAE1Q13564 534 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 SF1Q15637 639 aaKnown RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 DEFB110Q30KQ9 67 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 GPSM1Q86YR5 675 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 BMPERQ8N8U9 685 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 C19orf47Q8N9M1 422 aaKnown RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 OR2L3Q8NG85 312 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 CMKLR1Q99788 373 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 TMEM79Q9BSE2 394 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 TRIM54Q9BYV2 358 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 POLR1BQ9H9Y6 1135 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 APMAPQ9HDC9 416 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 CCDC177Q9NQR7 707 aaPredicted RBP17.84■□□□□ 0.45
CDX4-201ENST00000373514 PSD3Q9NYI0 1048 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 GRID1Q9ULK0 1009 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 WDFY3Q8IZQ1 3526 aa17.84■□□□□ 0.45
CDX4-201ENST00000373514 SUPT3HB4E1H0 165 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 KERAO60938 352 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 SUPT3HO75486 399 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 ZBTB11O95625 1053 aaPredicted RBP17.83■□□□□ 0.45
CDX4-201ENST00000373514 GSTA1P08263 222 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 ANXA5P08758 320 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 JMJD7P0C870 316 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 FOLR1P15328 257 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 HSD17B2P37059 387 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 MLLT3P42568 568 aaPredicted RBP17.83■□□□□ 0.45
CDX4-201ENST00000373514 CDKL1Q00532 357 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 FAM83EQ2M2I3 478 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 TECRLQ5HYJ1 363 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 THEMIS2Q5TEJ8 643 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 PRAMEF13Q5VWM6 474 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 C16orf46Q6P387 395 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 CCDC91Q7Z6B0 441 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 CKAP2Q8WWK9 683 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 ESAMQ96AP7 390 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 GRAMD1AQ96CP6 724 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 CTRCQ99895 268 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 TMEM121BQ9BXQ6 578 aaPredicted RBP17.83■□□□□ 0.45
CDX4-201ENST00000373514 FAM60AQ9NP50 221 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 CUEDC1Q9NWM3 386 aaPredicted RBP17.83■□□□□ 0.45
CDX4-201ENST00000373514 CD274Q9NZQ7 290 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 EMCNQ9ULC0 261 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 BTRCQ9Y297 605 aa17.83■□□□□ 0.45
CDX4-201ENST00000373514 CEP295Q9C0D2 2601 aa17.83■□□□□ 0.44
CDX4-201ENST00000373514 ZNF839A8K0R7 811 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 TK2O00142 265 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 HCRTR1O43613 425 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 BRINP1O60477 761 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 DHRS4L1P0CG22 281 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 COL6A2P12110 1019 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 EIF3IQ13347 325 aaKnown RBP17.82■□□□□ 0.44
CDX4-201ENST00000373514 GPR19Q15760 415 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 ICE2Q659A1 982 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 FCRL6Q6DN72 434 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 ARMC2Q8NEN0 867 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 OR56A3Q8NH54 315 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 GATA6Q92908 595 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 SLC22A18Q96BI1 424 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 RHBDF1Q96CC6 855 aa17.82■□□□□ 0.44
CDX4-201ENST00000373514 NXPE2Q96DL1 559 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms