RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SKA2Q8WVK7 121 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 SIGLEC10Q96LC7 697 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 CHRNA10Q9GZZ6 450 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 IGSF5Q9NSI5 407 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 IRAK4Q9NWZ3 460 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 IL1RAPL1Q9NZN1 696 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 DHCR7Q9UBM7 475 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 CSAG2Q9Y5P2 127 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZCWPW2A0A1B0GU75 182 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZG16O60844 167 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 SLCO2B1O94956 709 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 UMODP07911 640 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 PGAM1P18669 254 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 TSFMP43897 325 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 DEFB110Q30KQ9 67 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 AGAP7PQ5VUJ5 663 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 IRAK1BP1Q5VVH5 260 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 TLDC1Q6P9B6 456 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 TRIM73Q86UV7 250 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 DCUN1D3Q8IWE4 304 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 AGGF1Q8N302 714 aaeCLIP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZNF655Q8N720 491 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 CFAP61Q8NHU2 1237 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 CALML6Q8TD86 181 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 FAR1Q8WVX9 515 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 BIRC8Q96P09 236 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 AGAP4Q96P64 663 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 FAM167BQ9BTA0 163 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 NDC1Q9BTX1 674 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 UNKQ9C0B0 810 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 C20orf96Q9NUD7 363 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 OR6C2Q9NZP2 312 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 CRYL1Q9Y2S2 319 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 MRFAP1Q9Y605 127 aa18.4■□□□□ 0.54
TRAPPC3-204ENST00000373166 FBN2P35556 2912 aa18.39■□□□□ 0.54
TRAPPC3-204ENST00000373166 POLEQ07864 2286 aa18.39■□□□□ 0.54
TRAPPC3-204ENST00000373166 A0A1B0GUH1 482 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 E5RI56 91 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 SMAPO00193 183 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 E2F3O00716 465 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 FANCGO15287 622 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 HCRTR1O43613 425 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 CNOT3O75175 753 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 NIPSNAP2O75323 286 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 CHRM5P08912 532 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 SPTBP11277 2137 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 UGT2B7P16662 529 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 GABRA4P48169 554 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 FOXL2P58012 376 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 CDC16Q13042 620 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 MORF4L2Q15014 288 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 ZIC1Q15915 447 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 PRAMEF13Q5VWM6 474 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 B3GNTL1Q67FW5 361 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 TTC23LQ6PF05 361 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 IGFL2Q6UWQ7 119 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 UNC5AQ6ZN44 842 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 CENPUQ71F23 418 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 MCEMP1Q8IX19 187 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 GABPB2Q8TAK5 448 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 TRIM51Q9BSJ1 452 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 CCDC68Q9H2F9 335 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 FBXL4Q9UKA2 621 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 PLAGL1Q9UM63 463 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 APCP25054 2843 aa18.39■□□□□ 0.53
TRAPPC3-204ENST00000373166 PRSS44E7EML9 344 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 TTI1O43156 1089 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 PKMP14618 531 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 CHRM3P20309 590 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 MMP11P24347 488 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 PKLRP30613 574 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 CASQ1P31415 396 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC1A2P43004 574 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 RAB28P51157 221 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 DHX9Q08211 1270 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 ZNF169Q14929 603 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 C17orf53Q8N3J3 647 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 FOPNLQ96NB1 174 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 OR2A14Q96R47 310 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 NAT9Q9BTE0 207 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 EPS8L2Q9H6S3 715 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 SLC6A20Q9NP91 592 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 FBXO6Q9NRD1 293 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 CDC23Q9UJX2 597 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 FAM169AQ9Y6X4 670 aa18.38■□□□□ 0.53
TRAPPC3-204ENST00000373166 A0A0J9YY10 115 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 TTC4O95801 387 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 S1PR4O95977 384 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 CTSBP07858 339 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 STSP08842 583 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 TPBGLP0DKB5 382 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 ALAS2P22557 587 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 IVDP26440 423 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 ATP5DP30049 168 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 CTBP1Q13363 440 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 CRYMQ14894 314 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 TLR1Q15399 786 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 BBS9Q3SYG4 887 aa18.37■□□□□ 0.53
TRAPPC3-204ENST00000373166 FCRL6Q6DN72 434 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms