RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SMPDL3AQ92484 453 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 MIB2Q96AX9 1013 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 GPR21Q99679 349 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 FAM167BQ9BTA0 163 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 SLC25A23Q9BV35 468 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 NUDT9Q9BW91 350 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 SLC7A5P2Q9GIP4 190 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 ACSS2Q9NR19 701 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 CUTCQ9NTM9 273 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 ANKMY1Q9P2S6 941 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 PYCARDQ9ULZ3 195 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 MAD1L1Q9Y6D9 718 aa17.21■□□□□ 0.35
TRAPPC3-202ENST00000373162 MDC1Q14676 2089 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 CTAGE9A4FU28 777 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 VSTM2BA6NLU5 285 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 E5RI56 91 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SORBS2O94875 1100 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 ALBP02768 609 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 CATP04040 527 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 CCL11P51671 97 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SOX8P57073 446 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 RELAQ04206 551 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 GRM7Q14831 915 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 MLIPQ5VWP3 458 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 STEAP4Q687X5 459 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SUSD1Q6UWL2 747 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 TTLL10Q6ZVT0 673 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 OVCH1Q7RTY7 1134 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 RAB43Q86YS6 212 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 INPP5DQ92835 1189 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 C10orf90Q96M02 699 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 IP6K3Q96PC2 410 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SMAD5Q99717 465 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SELENOSQ9BQE4 189 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 DPH7Q9BTV6 452 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 WDR54Q9H977 334 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 FAM114A2Q9NRY5 505 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 PTRH2Q9Y3E5 179 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-202ENST00000373162 SHANK1Q9Y566 2161 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 CD63P08962 238 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 IMPA1P29218 277 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 FOLR3P41439 243 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PNLIPRP1P54315 467 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 EMP3P54852 163 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PRDX1Q06830 199 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 SLC9A5Q14940 896 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PPP1R7Q15435 360 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 NKG7Q16617 165 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 SPANXN3Q5MJ09 141 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 HIBCHQ6NVY1 386 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 CPNE9Q8IYJ1 553 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 RAB42Q8N4Z0 105 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 NACC2Q96BF6 587 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PTERQ96BW5 349 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 PWWP2AQ96N64 755 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 ZFYVE21Q9BQ24 234 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 NAT9Q9BTE0 207 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 IARS2Q9NSE4 1012 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
TRAPPC3-202ENST00000373162 IGLV3-12A0A075B6K2 115 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 TTC4O95801 387 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 TSPAN12O95859 305 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 ERVK-10P10266 1014 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 CMPK1P30085 196 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 HSD17B2P37059 387 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 PGDP52209 483 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 MORF4L2Q15014 288 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 IGFBP7Q16270 282 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 DCAF10Q5QP82 559 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 WASHC2DQ5SRD0 308 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 RBM20Q5T481 1227 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 ICE2Q659A1 982 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 SYDE1Q6ZW31 735 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 PCGF5Q86SE9 256 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 Q8NA96 180 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 OR2A5Q96R48 311 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 ACAT2Q9BWD1 397 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 P4HTMQ9NXG6 502 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 SLC17A6Q9P2U8 582 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 CTSFQ9UBX1 484 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 NDOR1Q9UHB4 597 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
TRAPPC3-202ENST00000373162 A0A0J9YVX5 310 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 AHSGP02765 367 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 MMP11P24347 488 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 OTX2P32243 289 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 RRADP55042 308 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 CDKN2DP55273 166 aa17.17■□□□□ 0.34
TRAPPC3-202ENST00000373162 SNRPNP63162 240 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms