RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 GTF2H3Q13889 308 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 CLCA4Q14CN2 919 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 MAD2L1BPQ15013 274 aaPredicted RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 EIF4HQ15056 248 aaKnown RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 TBCEQ15813 527 aaPredicted RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 INAQ16352 499 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 PGS1Q32NB8 556 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 ANKDD1AQ495B1 522 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 FRG2Q64ET8 278 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 RGMBQ6NW40 437 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 FAHD1Q6P587 224 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 DOK6Q6PKX4 331 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 SUSD1Q6UWL2 747 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 USP43Q70EL4 1123 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 CHST15Q7LFX5 561 aaPredicted RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 CYP2U1Q7Z449 544 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 CAMKMTQ7Z624 323 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 SYT12Q8IV01 421 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 CPXM2Q8N436 756 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 SLC43A3Q8NBI5 491 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 ZNF540Q8NDQ6 660 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 DYNC2LI1Q8TCX1 351 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 SLC38A4Q969I6 547 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 DACH2Q96NX9 599 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 FRG2BQ96QU4 278 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 PANX1Q96RD7 426 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 CSF3RQ99062 836 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 ITPAQ9BY32 194 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 GABARAPL3Q9BY60 117 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 ACPTQ9BZG2 426 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 RIBC2Q9H4K1 309 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 IL26Q9NPH9 171 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 SERHLQ9NQF3 203 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 THG1LQ9NWX6 298 aaKnown RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 ZNF282Q9UDV7 671 aaPredicted RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 VPS51Q9UID3 782 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 TDRKHQ9Y2W6 561 aaKnown RBP10.59□□□□□ -0.71
LCN2-202ENST00000372998 PCDHB11Q9Y5F2 797 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
LCN2-202ENST00000372998 ANKRD12Q6UB98 2062 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 IGLV3-16A0A075B6K0 115 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 KCNE1BA0A087WTH5 132 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 IQCF5A8MTL0 148 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 MAGEB17A8MXT2 336 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 KDM1AO60341 852 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 TSPAN3O60637 253 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 INMTO95050 263 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 GJB5O95377 273 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 VNN2O95498 520 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CD160O95971 181 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 FUCA1P04066 466 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SEMG1P04279 462 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 HTR1AP08908 422 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SLC10A3P09131 477 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 ZNF30P17039 623 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 AMD1P17707 334 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SDC1P18827 310 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 PSMB9P28065 219 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 S100A5P33763 92 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SOX11P35716 441 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CLK1P49759 484 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 EPHB3P54753 998 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 DEFA1P59665 94 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 DEFA3P59666 94 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 HMGCS1Q01581 520 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 GBX1Q14549 363 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SPCS2Q15005 226 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CHRNA6Q15825 494 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 NKG7Q16617 165 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 NDUFA5Q16718 116 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 MPPE1Q53F39 396 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CCDC92Q53HC0 331 aaPredicted RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 NOXRED1Q6NXP6 359 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 ZCCHC8Q6NZY4 707 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 NCCRP1Q6ZVX7 275 aaPredicted RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 B3GNT8Q7Z7M8 397 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 RBM23Q86U06 439 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 ZZZ3Q8IYH5 903 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CHPFQ8IZ52 775 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 NATD1Q8N6N6 113 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 FAM86B1Q8N7N1 296 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 SCAIQ8N9R8 606 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 ATG16L2Q8NAA4 619 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 DENND6BQ8NEG7 585 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 ZHX1-C8orf76Q96EF9 292 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 HRASLS5Q96KN8 279 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 ZNF300Q96RE9 604 aaPredicted RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 CPEB1Q9BZB8 566 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 CARS2Q9HA77 564 aaKnown RBP10.58□□□□□ -0.72
LCN2-202ENST00000372998 ACOT13Q9NPJ3 140 aa10.58□□□□□ -0.72
LCN2-202ENST00000372998 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms