RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 RHOJQ9H4E5 214 aa19.21■□□□□ 0.67
TMEM53-205ENST00000372244 ACTL8Q9H568 366 aa19.21■□□□□ 0.67
TMEM53-205ENST00000372244 ZDHHC18Q9NUE0 388 aa19.21■□□□□ 0.67
TMEM53-205ENST00000372244 SPTA1P02549 2419 aa19.21■□□□□ 0.67
TMEM53-205ENST00000372244 COL6A6A6NMZ7 2263 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 ESYT3A0FGR9 886 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 FAM159BA6NKW6 160 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 SYF2O95926 243 aaKnown RBP19.2■□□□□ 0.66
TMEM53-205ENST00000372244 FURINP09958 794 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 PRKAR1AP10644 381 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 CMPK1P30085 196 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 RPA3P35244 121 aaPredicted RBP19.2■□□□□ 0.66
TMEM53-205ENST00000372244 MAGEA4P43358 317 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 RELAQ04206 551 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 ERV3-1Q14264 604 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 NAA25Q14CX7 972 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 PTCHD3Q3KNS1 767 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 ATP1A1-AS1Q5TC04 95 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 CAPN12Q6ZSI9 719 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 PPFIBP2Q8ND30 876 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 GBP5Q96PP8 586 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 PLCD4Q9BRC7 762 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 SEMA4CQ9C0C4 833 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 SLC7A5P2Q9GIP4 190 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 LRRC4CQ9HCJ2 640 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 SLC6A20Q9NP91 592 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 ANKMY1Q9P2S6 941 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 SRPK3Q9UPE1 567 aa19.2■□□□□ 0.66
TMEM53-205ENST00000372244 FASNP49327 2511 aaKnown RBP19.19■□□□□ 0.66
TMEM53-205ENST00000372244 FITM1A5D6W6 292 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 NRP2O60462 931 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 C1QL1O75973 258 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 PHKG1Q16816 387 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 TCTE1Q5JU00 501 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 ICE2Q659A1 982 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 ZNF425Q6IV72 752 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 C16orf46Q6P387 395 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 FAM198BQ6UWH4 519 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 NOA1Q8NC60 698 aaKnown RBP19.19■□□□□ 0.66
TMEM53-205ENST00000372244 MNS1Q8NEH6 495 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 PROKR1Q8TCW9 393 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 ANKRD7Q92527 254 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 MED8Q96G25 268 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 MRPS30Q9NP92 439 aaKnown RBP19.19■□□□□ 0.66
TMEM53-205ENST00000372244 STOX2Q9P2F5 926 aaPredicted RBP19.19■□□□□ 0.66
TMEM53-205ENST00000372244 TAC3Q9UHF0 121 aa19.19■□□□□ 0.66
TMEM53-205ENST00000372244 FAM95CA0A1B0GW59 222 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 ONECUT2O95948 504 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 PRB1P04280 392 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 AGXTP21549 392 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 TAS2R39P59534 338 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 ABATP80404 500 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 DCDP81605 110 aaKnown RBP19.18■□□□□ 0.66
TMEM53-205ENST00000372244 ZXDCQ2QGD7 858 aaPredicted RBP19.18■□□□□ 0.66
TMEM53-205ENST00000372244 RNF44Q7L0R7 432 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 SYVN1Q86TM6 617 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 KIF18AQ8NI77 898 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 CDKL2Q92772 493 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 VPS39Q96JC1 886 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 SELENOSQ9BQE4 189 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 NDC1Q9BTX1 674 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 DMGDHQ9UI17 866 aaKnown RBP19.18■□□□□ 0.66
TMEM53-205ENST00000372244 BOD1L1Q8NFC6 3051 aa19.18■□□□□ 0.66
TMEM53-205ENST00000372244 LOC105369274A0A096LPK9 316 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 LOC102723532A0A0G2JNH3 316 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 EIF4E1BA6NMX2 242 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 FAM87AP0C7U9 286 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 ZNF37AP17032 561 aaPredicted RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 ARSFP54793 590 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 RPS18P62269 152 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 UGT8Q16880 541 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 DEFB109BQ30KR1 87 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 WASHC2DQ5SRD0 308 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 YOD1Q5VVQ6 348 aaPredicted RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 FRMPD2BQ6IN97 320 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 PAQR7Q86WK9 346 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 CCDC25Q86WR0 208 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 CEP97Q8IW35 865 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 OR4N4Q8N0Y3 316 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 ENDOVQ8N8Q3 282 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 CPNE1Q99829 537 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 ARHGAP9Q9BRR9 750 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 GEMIN8Q9NWZ8 242 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 DHCR7Q9UBM7 475 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 TCFL5Q9UL49 500 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 SNX7Q9UNH6 387 aa19.17■□□□□ 0.66
TMEM53-205ENST00000372244 MTO1Q9Y2Z2 717 aaKnown RBP19.17■□□□□ 0.66
TMEM53-205ENST00000372244 KLF7O75840 302 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-205ENST00000372244 CCNDBP1O95273 360 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 WISP3O95389 354 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-205ENST00000372244 CCR10P46092 362 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 AP1S2P56377 157 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 POU4F1Q01851 419 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 TSTA3Q13630 321 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-205ENST00000372244 GRM7Q14831 915 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 GLE1Q53GS7 698 aaKnown RBP19.16■□□□□ 0.66
TMEM53-205ENST00000372244 AGTRAPQ6RW13 159 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 MBOAT1Q6ZNC8 495 aa19.16■□□□□ 0.66
TMEM53-205ENST00000372244 NKAPQ8N5F7 415 aaKnown RBP19.16■□□□□ 0.66
TMEM53-205ENST00000372244 APOBEC4Q8WW27 367 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms