RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PTGESO14684 152 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TFECO14948 347 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TRIM3O75382 744 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PRKCGP05129 697 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ALPPP05187 535 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 APRTP07741 180 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ZP3P21754 424 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 HLA-FP30511 346 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 HOXC8P31273 242 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 GMPRP36959 345 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 HNF4AP41235 474 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MATKP42679 507 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SLC15A1P46059 708 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CCR10P46092 362 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 RFX2P48378 723 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PPM1FP49593 454 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MEOX2P50222 304 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MAP2K6P52564 334 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 YWHAZP63104 245 aaKnown RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PLAURQ03405 335 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CDH17Q12864 832 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TRAF3Q13114 568 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SEMA3AQ14563 771 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ODF1Q14990 250 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PDSS1Q5T2R2 415 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 MPP7Q5T2T1 576 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 DENND5AQ6IQ26 1287 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 NXPE1Q8N323 547 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 YIPF7Q8N8F6 280 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 CHDHQ8NE62 594 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 OR4D10Q8NGI6 311 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 OR52N1Q8NH53 320 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 ELMO2Q96JJ3 720 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SERPINB11Q96P15 392 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 OR2A14Q96R47 310 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SDHCQ99643 169 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 GAL3ST1Q99999 423 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 TINAGL1Q9GZM7 467 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-203ENST00000372232 SMYD2Q9NRG4 433 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 HPF1Q9NWY4 346 aa8.63□□□□□ -1.03
ATG4A-203ENST00000372232 PNMA8CA0A1B0GUJ8 204 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 HNRNPCL2B2RXH8 293 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 EEF2KO00418 725 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 SPINT1O43278 529 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CSH1P0DML2 217 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CSH2P0DML3 217 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 IL7RP16871 459 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CYP2B6P20813 491 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CNTFP26441 200 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 HLA-DMAP28067 261 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 PER3P56645 1201 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 SNRPD2P62316 118 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 RIPPLY1Q0D2K3 151 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 FSCN1Q16658 493 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CST9Q5W186 159 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 RAP1GAP2Q684P5 730 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 LRRC8EQ6NSJ5 796 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TAF2Q6P1X5 1199 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 LRFN4Q6PJG9 635 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 GALNT10Q86SR1 603 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 UNC5BQ8IZJ1 945 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 C8orf59Q8N0T1 100 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 DEFB106AQ8N104 65 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 OR8H1Q8NGG4 311 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 NDRG1Q92597 394 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 RIT1Q92963 219 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 HDAC10Q969S8 669 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 FUBP1Q96AE4 644 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 PTERQ96BW5 349 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 MYRFLQ96LU7 910 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 ZFP42Q96MM3 310 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 DCLRE1CQ96SD1 692 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 PELOQ9BRX2 385 aaKnown RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 DUSP16Q9BY84 665 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 LDAHQ9H6V9 325 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 WDR55Q9H6Y2 383 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-203ENST00000372232 POPDC2Q9HBU9 364 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 LRRC4Q9HBW1 653 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TMLHEQ9NVH6 421 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 RAPGEFL1Q9UHV5 662 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TRAPPC4Q9Y296 219 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 ANKRD6Q9Y2G4 727 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 A0A1B0GVM2 712 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 ATP6AP2A0A1C7CYW4 349 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 PQLC2LA1A4F0 135 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CCDC182A6NF36 153 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CLDN5O00501 218 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 E2F3O00716 465 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TNFRSF10CO14798 259 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 TBC1D4O60343 1298 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 ADAMTS4O75173 837 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 METTL18O95568 372 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 HSPA4LO95757 839 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 CDK1P06493 297 aa8.62□□□□□ -1.03
ATG4A-203ENST00000372232 HSMCR30P0CW71 290 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms