RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NAE1Q13564 534 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 AP1ARQ63HQ0 302 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 AGTRAPQ6RW13 159 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 MED8Q96G25 268 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 CCDC138Q96M89 665 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 VPS35Q96QK1 796 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 FAM83CQ9BQN1 747 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 TOR3AQ9H497 397 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 E7EQ34 232 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 RECQL5O94762 991 aaPredicted RBP28.06■■■□□ 2.08
SSBP3-204ENST00000371320 ELFN1P0C7U0 828 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 MTAPQ13126 283 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 DOC2AQ14183 400 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 ACOX1Q15067 660 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 DPY19L1Q2PZI1 675 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 WDR20Q8TBZ3 569 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 GLMNQ92990 594 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 MTERF1Q99551 399 aaKnown RBP28.06■■■□□ 2.08
SSBP3-204ENST00000371320 OSBPL10Q9BXB5 764 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 ING2Q9H160 280 aa28.06■■■□□ 2.08
SSBP3-204ENST00000371320 THG1LQ9NWX6 298 aaKnown RBP28.06■■■□□ 2.08
SSBP3-204ENST00000371320 STOX2Q9P2F5 926 aaPredicted RBP28.06■■■□□ 2.08
SSBP3-204ENST00000371320 SOBPA7XYQ1 873 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 CATP04040 527 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 IL1RNP18510 177 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 CTNNB1P35222 781 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 YAP1P46937 504 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 HNRNPFP52597 415 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 SRSF11Q05519 484 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 DDX39BQ13838 428 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 MYBPC3Q14896 1274 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 DUOXA1Q1HG43 343 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 RTL10Q7L3V2 364 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 LILRA3Q8N6C8 439 aaPredicted RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 ZNF366Q8N895 744 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 OR7A2PQ8NGA2 310 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 FOXJ1Q92949 421 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 AP2M1Q96CW1 435 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 LRIG1Q96JA1 1093 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 CCM2Q9BSQ5 444 aa28.05■■■□□ 2.08
SSBP3-204ENST00000371320 REXO4Q9GZR2 422 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 LIN28AQ9H9Z2 209 aaKnown RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 IFT80Q9P2H3 777 aaPredicted RBP28.05■■■□□ 2.08
SSBP3-204ENST00000371320 EVPLLA8MZ36 301 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 PRMT3O60678 531 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 HOXB6P17509 224 aaKnown RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 SHMT2P34897 504 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 MMP12P39900 470 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 TRPC1P48995 793 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 HLCSP50747 726 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 VAC14Q08AM6 782 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 TTC23Q5W5X9 447 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 ERAP2Q6P179 960 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 LIPIQ6XZB0 460 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 HS3ST5Q8IZT8 346 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 ZCCHC7Q8N3Z6 543 aaKnown RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 POF1BQ8WVV4 589 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 PYURFQ96I23 114 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 RBM4BQ9BQ04 359 aaKnown RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 RBM4Q9BWF3 364 aaKnown RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 TIMMDC1Q9NPL8 285 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 CIDEBQ9UHD4 219 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 PLXNA2O75051 1894 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 PPP2R2BQ00005 443 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 TMEM115Q12893 351 aaPredicted RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 CCSMST1Q4G0I0 132 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 SPESP1Q6UW49 350 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 EID3Q8N140 333 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 HCAR2Q8TDS4 363 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 ING5Q8WYH8 240 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 PANX1Q96RD7 426 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 POLR1BQ9H9Y6 1135 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 SPATA6Q9NWH7 488 aaPredicted RBP28.04■■■□□ 2.08
SSBP3-204ENST00000371320 USE1Q9NZ43 259 aa28.04■■■□□ 2.08
SSBP3-204ENST00000371320 A0A1B0GVG6 124 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 SLC9A3R1O14745 358 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-204ENST00000371320 FPGTO14772 594 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 NOBOXO60393 691 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 XYLBO75191 536 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 ELK4P28324 431 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 BDKRB1P46663 353 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 PRLHRP49683 370 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 EPS8Q12929 822 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 PMS2P3Q13401 168 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 CBX2Q14781 532 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-204ENST00000371320 UGT8Q16880 541 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 PRSS36Q5K4E3 855 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 CES5AQ6NT32 575 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 GRASPQ7Z6J2 395 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-204ENST00000371320 PNPT1Q8TCS8 783 aaKnown RBP28.03■■■□□ 2.08
SSBP3-204ENST00000371320 ISOC1Q96CN7 298 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 RUVBL1Q9Y265 456 aaKnown RBP28.03■■■□□ 2.08
SSBP3-204ENST00000371320 SLC5A10A0PJK1 596 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 E2F6O75461 281 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 COX7A2P14406 83 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 BMPR1AP36894 532 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 HNF4AP41235 474 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 DGKGP49619 791 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 SLC14A1Q13336 389 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 GRIN2CQ14957 1233 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms