RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ERVK-21P61565 698 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ST8SIA6P61647 398 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 E2F2Q14209 437 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 NEK5Q6P3R8 708 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 FGF13Q92913 245 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 DUS3LQ96G46 650 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 PPP3R2Q96LZ3 170 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 VPS35Q96QK1 796 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ZNF347Q96SE7 839 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 FAM83CQ9BQN1 747 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 TRIM54Q9BYV2 358 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 ANKMY1Q9P2S6 941 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 LEF1Q9UJU2 399 aaPredicted RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 ZNF490Q9ULM2 529 aaPredicted RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 CLDN9O95484 217 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 RPL38P63173 70 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 SP140Q13342 867 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 PTCHD3Q3KNS1 767 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 SGO1Q5FBB7 561 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 C9orf64Q5T6V5 341 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 KCTD8Q6ZWB6 473 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 LRRC70Q7Z2Q7 622 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 MMAAQ8IVH4 418 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 RAVER1Q8IY67 606 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 RASGEF1AQ8N9B8 481 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 SMARCD2Q92925 531 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 GLYATL1Q969I3 302 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 PYCR2Q96C36 320 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 WRAP53Q9BUR4 548 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 RAD18Q9NS91 495 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 INTS7Q9NVH2 962 aaKnown RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 NUP210Q8TEM1 1887 aaPredicted RBP12.45□□□□□ -0.42
GPC3-201ENST00000370818 TRANK1O15050 2925 aa12.45□□□□□ -0.42
GPC3-201ENST00000370818 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 KPNA5O15131 536 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SLC16A5O15375 505 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 RGS14O43566 566 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 TSPAN6O43657 245 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 NFATC1O95644 943 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SLC2A4P14672 509 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 NR4A1P22736 598 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SLC7A1P30825 629 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HNMTP50135 292 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 MAPK10P53779 464 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 KCNC3Q14003 757 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 PTGR1Q14914 329 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 KIAA0040Q15053 153 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 ACOX1Q15067 660 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
GPC3-201ENST00000370818 DUSP6Q16828 381 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HNRNPA1L2Q32P51 320 aaKnown RBP12.44□□□□□ -0.42
GPC3-201ENST00000370818 PLA2G4EQ3MJ16 856 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 PERM1Q5SV97 790 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 ERAP2Q6P179 960 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 NEK10Q6ZWH5 1172 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 TMCO5AQ8N6Q1 288 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 ASZ1Q8WWH4 475 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 AP2M1Q96CW1 435 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 CNDP2Q96KP4 475 aaKnown RBP12.44□□□□□ -0.42
GPC3-201ENST00000370818 ACTR8Q9H981 624 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 FAM8A1Q9UBU6 413 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 EGFL7Q9UHF1 273 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 YBX2Q9Y2T7 364 aaKnown RBP12.44□□□□□ -0.42
GPC3-201ENST00000370818 KCNE1BA0A087WTH5 132 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HEPACAM2A8MVW5 462 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SLC28A1O00337 649 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SOD1P00441 154 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 FTH1P02794 183 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
GPC3-201ENST00000370818 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HPCAL1P37235 193 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 CASP2P42575 452 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 LDLRAP1Q5SW96 308 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 PRAMEF9Q5VWM5 478 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 TCAIMQ8N3R3 496 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 DPP10Q8N608 796 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 LILRA3Q8N6C8 439 aaPredicted RBP12.44□□□□□ -0.42
GPC3-201ENST00000370818 ANKFN1Q8N957 763 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 MFSD2AQ8NA29 543 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 OR2T34Q8NGX1 318 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 OR2T3Q8NH03 318 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 FAM110BQ8TC76 370 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 ZUFSPQ96AP4 578 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HIST1H2AHQ96KK5 128 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 COQ10AQ96MF6 247 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HIST1H2AJQ99878 128 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 SLC29A3Q9BZD2 475 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 HPS4Q9NQG7 708 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
GPC3-201ENST00000370818 ANTXRLA6NF34 631 aa12.43□□□□□ -0.42
GPC3-201ENST00000370818 WNT9AO14904 365 aa12.43□□□□□ -0.42
GPC3-201ENST00000370818 KCNH1O95259 989 aa12.43□□□□□ -0.42
GPC3-201ENST00000370818 PRNPP04156 253 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms