RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 STRADAQ7RTN6 431 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ZFPM1Q8IX07 1006 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 HAVCR1Q96D42 359 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 REPS1Q96D71 796 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 DOK1Q99704 481 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ZNF471Q9BX82 626 aaPredicted RBP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 TNKS2Q9H2K2 1166 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 SARS2Q9NP81 518 aaKnown RBP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ARHGEF4Q9NR80 690 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 DZANK1Q9NVP4 752 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 PIH1D1Q9NWS0 290 aaKnown RBP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 FARSAQ9Y285 508 aaKnown RBP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 MRC1P22897 1456 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 TRAPPC13A5PLN9 417 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 CBX4O00257 560 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ANXA5P08758 320 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ARP10275 920 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 CDNFQ49AH0 187 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 BTLAQ7Z6A9 289 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 LRRTM3Q86VH5 581 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 ZFP82Q8N141 532 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 CNTNAP3BQ96NU0 1288 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 IL22Q9GZX6 179 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 NUDT15Q9NV35 164 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 TJP2Q9UDY2 1190 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 STAP1Q9ULZ2 295 aa10.18□□□□□ -0.78
PRDM1-201ENST00000369089 OAS3Q9Y6K5 1087 aaKnown RBP10.18□□□□□ -0.78
PRDM1-201ENST00000369089 TCRBV3S1A0A5B6 114 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 POM121BA6NF01 834 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PRAMEF2O60811 474 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MICAL2O94851 1124 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 FARS2O95363 451 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 RB1P06400 928 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MNDAP41218 407 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TGM4P49221 684 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 CRADDP78560 199 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 RAB33AQ14088 237 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OPCMLQ14982 345 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 CDHR3Q6ZTQ4 885 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ZER1Q7Z7L7 766 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 BEND7Q8N7W2 519 aaPredicted RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ACBD4Q8NC06 268 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 SHC3Q92529 594 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PIGKQ92643 395 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TANKQ92844 425 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 B3GNT5Q9BYG0 378 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PCDHGA12O60330 932 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 BRINP1O60477 761 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TMEM63AO94886 807 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 GUCA1CO95843 209 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 RBM34P42696 430 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 POLR2JP52435 117 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TNFRSF17Q02223 184 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PTSQ03393 145 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PCLAFQ15004 111 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 SLC35F1Q5T1Q4 408 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 DET1Q7L5Y6 550 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 SLC16A13Q7RTY0 426 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 VN1R5Q7Z5H4 357 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ZDHHC21Q8IVQ6 265 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 INO80EQ8NBZ0 244 aaPredicted RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 CHDHQ8NE62 594 aaPredicted RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PPP1R13LQ8WUF5 828 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ZFP3Q96NJ6 502 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OR2M4Q96R27 311 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 WDR77Q9BQA1 342 aaPredicted RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OR51J1Q9H342 316 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ACSS2Q9NR19 701 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MIOXQ9UGB7 285 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ATXN7L1Q9ULK2 861 aaPredicted RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 LIPT1Q9Y234 373 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PEAK1Q9H792 1746 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OR5K3A6NET4 321 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 METTL15A6NJ78 407 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 IPO13O94829 963 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 KCNK2O95069 426 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 MSR1P21757 451 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 PER3P56645 1201 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 GPR17Q13304 367 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 SF3A2Q15428 464 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ADPRMQ3LIE5 342 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 LEXMQ3ZCV2 418 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OVOS1Q6IE37 1185 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TIFABQ6ZNK6 161 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 SLC26A9Q7LBE3 791 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 ZNF565Q8N9K5 539 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 OR2L5Q8NG80 312 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 DUS3LQ96G46 650 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 TTPALQ9BTX7 342 aa10.17□□□□□ -0.78
PRDM1-201ENST00000369089 RIOK2Q9BVS4 552 aaKnown RBP10.17□□□□□ -0.78
PRDM1-201ENST00000369089 CATSPERBQ9H7T0 1116 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms