RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 DNPH1O43598 174 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RGS10O43665 173 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 GUCY1B2O75343 617 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ERN1O75460 977 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CABYRO75952 493 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 C1QL1O75973 258 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RECQL5O94762 991 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 MFN2O95140 757 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PDE8BO95263 885 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 MT-ATP6P00846 226 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 GH2P01242 217 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CXCL10P02778 98 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ZNF735P0CB33 412 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ZCCHC18P0CG32 403 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 HGFP14210 728 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 POLR2EP19388 210 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 HNRNPA2B1P22626 353 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 AHCYP23526 432 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 TKTP29401 623 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PPP2R1AP30153 589 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CCND2P30279 289 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ARHGAP25P42331 645 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CCR10P46092 362 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ALDH7A1P49419 539 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ARSEP51690 589 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 HMGA2P52926 109 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PRKAG1P54619 331 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ATP5IP56385 69 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CYP4F2P78329 520 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PHEXP78562 749 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 LGALS3BPQ08380 585 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ABRQ12979 859 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 LCP2Q13094 533 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 SCGB2A2Q13296 93 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ATP1A4Q13733 1029 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 IRF3Q14653 427 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CRYMQ14894 314 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PCGF3Q3KNV8 242 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RARS2Q5T160 578 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ARHGAP40Q5TG30 622 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ABHD17BQ5VST6 288 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ABLIM2Q6H8Q1 611 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RGS7BPQ6MZT1 257 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 INO80CQ6PI98 192 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 BLOC1S2Q6QNY1 142 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CRELD2Q6UXH1 353 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 TPGS1Q6ZTW0 290 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 LRRC8DQ7L1W4 858 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 G2E3Q7L622 706 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ANKS1BQ7Z6G8 1248 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ADGRF2Q8IZF7 708 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 NFKBIDQ8NI38 313 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 SCAMP5Q8TAC9 235 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ZNF461Q8TAF7 563 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 TMEM171Q8WVE6 324 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 ASZ1Q8WWH4 475 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 MAP4K1Q92918 833 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 NT5C3BQ969T7 300 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 TRAPPC9Q96Q05 1148 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 OR1F2PQ96R84 312 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CGREF1Q99674 301 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PIMREGQ9BSJ6 248 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 SF3B5Q9BWJ5 86 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 FAM192AQ9GZU8 254 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RAB33BQ9H082 229 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 SLC25A32Q9H2D1 315 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 TP63Q9H3D4 680 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 RMND5AQ9H871 391 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CHODLQ9H9P2 273 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.96□□□□□ -1.625e-12■■■■■ 43.9
ECHDC1-204ENST00000368292 PRDM8Q9NQV8 689 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PAQR5Q9NXK6 330 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 CA14Q9ULX7 337 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 COPG1Q9Y678 874 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 FREM2Q5SZK8 3169 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 PLXNA4Q9HCM2 1894 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 MROH7-TTC4A0A0A0MT08 1334 aa4.96□□□□□ -1.62
ECHDC1-204ENST00000368292 A0A1B0GTQ1 180 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 MYO1GB0I1T2 1018 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 C2CD4DB7Z1M9 353 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 PRR23D1E9PI22 279 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 C5orf67F2Z3F1 127 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 F5H697 171 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 WRBO00258 174 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 HIP1O00291 1037 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 TRAPPC3O43617 180 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 HEXIM1O94992 359 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 ONECUT2O95948 504 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 LGI1O95970 557 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 PRB1P04280 392 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 PCCBP05166 539 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 SERPINF2P08697 491 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 SPARCP09486 303 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 PRR23D2P0DMB1 279 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 THRBP10828 461 aa4.95□□□□□ -1.62
ECHDC1-204ENST00000368292 ITGAMP11215 1152 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms