RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 SLC32A1Q9H598 525 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 IL21RQ9HBE5 538 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 FZD3Q9NPG1 666 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 CALML5Q9NZT1 146 aa12.58□□□□□ -0.39
PTPRK-207ENST00000368226 E7ENX8 843 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 BTN3A3O00478 584 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 AGXTP21549 392 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 S100GP29377 79 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 PRICKLE1Q96MT3 831 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 KLRF1Q9NZS2 232 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 SRRM3A6NNA2 597 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 CHST10O43529 356 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 DIRAS1O95057 198 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ACVR2AP27037 513 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 PNLIPRP1P54315 467 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 CHAF1BQ13112 559 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 SCAMP4Q969E2 229 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 NUSAP1Q9BXS6 441 aaKnown RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 PLK4O00444 970 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 AGTR2P50052 363 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 CLCN4P51793 760 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 UFM1P61960 85 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 GPRC6AQ5T6X5 926 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 Q6ZVL8 140 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 NFKBIDQ8NI38 313 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 EFHD2Q96C19 240 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 TMA7Q9Y2S6 64 aaKnown RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 FAM234BA2RU67 622 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 C9J4A7 227 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-207ENST00000368226 LYNP07948 512 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 CDH1P12830 882 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 GALK1P51570 392 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 GPX6P59796 221 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ERVK-8P63133 956 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ODF4Q2M2E3 257 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 TDRPQ86YL5 185 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ROPN1LQ96C74 230 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
PTPRK-207ENST00000368226 CH25HO95992 272 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PSMD7P51665 324 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 FRG2Q64ET8 278 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.43e-7■■■■■ 27
PTPRK-207ENST00000368226 HMGN2P46Q86SG4 172 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 OR5T3Q8NGG3 340 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SLC22A18Q96BI1 424 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 CENPNQ96H22 339 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 GSDMCQ9BYG8 508 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 ING3Q9NXR8 418 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 IRGMA1A4Y4 181 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SLC6A9P48067 706 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PTCHD3Q3KNS1 767 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 TPRG1Q6ZUI0 275 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 TEPSINQ96N21 525 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SEZ6LQ9BYH1 1024 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 RIMKLBQ9ULI2 386 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PIRO00625 290 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 DLX3O60479 287 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 CSNK2A2P19784 350 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 CXCR1P25024 350 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PDHA2P29803 388 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 DSTNP60981 165 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 LMAN2Q12907 356 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SP140Q13342 867 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PGBD2Q6P3X8 592 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PQLC3Q8N755 202 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 OR9I1Q8NGQ6 314 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 OR10T2Q8NGX3 314 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SHDQ96IW2 340 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 TMEM248Q9NWD8 314 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 TOR1BO14657 336 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 AHCYL1O43865 530 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 GDI2P50395 445 aaKnown RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 ABATP80404 500 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PRKD1Q15139 912 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 ZC3HC1Q86WB0 502 aaKnown RBP12.57□□□□□ -0.4
PTPRK-207ENST00000368226 RASSF5Q8WWW0 418 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 IRF7Q92985 503 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SPATA9Q9BWV2 254 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 PPP3R1P63098 170 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF311Q5JNZ3 666 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 TMEM164Q5U3C3 297 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 SLC29A4Q7RTT9 530 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 IGSF8Q969P0 613 aa12.57□□□□□ -0.4
PTPRK-207ENST00000368226 EBF2Q9HAK2 575 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms