RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ARF6P62330 175 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GPR33Q49SQ1 333 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFAF7Q7L592 441 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NLGN2Q8NFZ4 835 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RSC1A1Q92681 617 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FZD4Q9ULV1 537 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NOX1Q9Y5S8 564 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 A8MX80 341 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TSPAN3O60637 253 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC43A1O75387 559 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 VASPP50552 380 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SPIN4Q56A73 249 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC70Q7Z2Q7 622 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OR5K1Q8NHB7 308 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SGTBQ96EQ0 304 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ASIC5Q9NY37 505 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KCMF1Q9P0J7 381 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 IRAK2O43187 625 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FKTNO75072 461 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PTPN9P43378 593 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MEF2AQ02078 507 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CCDC85BQ15834 202 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CYP2A13Q16696 494 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OR13D1Q8NGV5 346 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NIP7Q9Y221 180 aaKnown RBP eCLIP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TNFSF13BQ9Y275 285 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 A0A0G2JMP0 313 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KANTRA0A1W2PQU2 76 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFS8O00217 210 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DIRAS1O95057 198 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MMP2P08253 660 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OR4M2Q8NGB6 313 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RBM18Q96H35 190 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ELOVL6Q9H5J4 265 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RPS6KL1Q9Y6S9 549 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 WASF2Q9Y6W5 498 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLIT3O75094 1523 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 BCKDKO14874 412 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LATS1O95835 1130 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CHMP24386 653 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 WDR4P57081 412 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PKN3Q6P5Z2 889 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MRPS23Q9Y3D9 190 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NUBP2Q9Y5Y2 271 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MT-CO1P00395 513 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SOX10P56693 466 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TRAPPC3LQ5T215 181 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OR52E8Q6IFG1 317 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TOMM20LQ6UXN7 152 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TBC1D10CQ8IV04 446 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 HID1Q8IV36 788 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RNF148Q8N7C7 305 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NARS2Q96I59 477 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ATXN3LQ9H3M9 355 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ITM2AO43736 263 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MERTKQ12866 999 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 L3HYPDHQ96EM0 354 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 AMDHD1Q96NU7 426 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SARS2Q9NP81 518 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CNPP09543 421 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 HTR1EP28566 365 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OPRL1P41146 370 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TRILQ7L0X0 811 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 BPHLQ86WA6 291 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SYT12Q8IV01 421 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC9A6Q92581 669 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ISL2Q96A47 359 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ORAI2Q96SN7 254 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MAP3K3Q99759 626 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CST11Q9H112 138 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CLEC11AQ9Y240 323 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NME7Q9Y5B8 376 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT21O43809 227 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CSF1P09603 554 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 IFI6P09912 130 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PTPN1P18031 435 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARCN1P48444 511 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GLUD2P49448 558 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 APLP1P51693 650 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TWF1Q12792 350 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ADIPOR2Q86V24 386 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF781Q8N8C0 355 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ATP6V1C2Q8NEY4 427 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CALN1Q9BXU9 219 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TNFRSF10AO00220 468 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PHOX2AO14813 284 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LEFTY1O75610 366 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RGS9O75916 674 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RCAN2Q14206 197 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FASTKQ14296 549 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TSEN2Q8NCE0 465 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GAL3ST3Q96A11 431 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF641Q96N77 438 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SOX17Q9H6I2 414 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZDHHC6Q9H6R6 413 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZBTB26Q9HCK0 441 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TCRBV9S1A1TA0A576 114 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 J3QRK9 145 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NUPL2O15504 423 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms