RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CRB3Q9BUF7 120 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 MRPS30Q9NP92 439 aaKnown RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 ZNF282Q9UDV7 671 aaPredicted RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 PLEKHB1Q9UF11 243 aaPredicted RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 CDC14AQ9UNH5 594 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 CRYL1Q9Y2S2 319 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 HS3ST3B1Q9Y662 390 aa14.18□□□□□ -0.14
CTSD-202ENST00000367196 COPG1Q9Y678 874 aaKnown RBP14.18□□□□□ -0.14
CTSD-202ENST00000367196 PRRC2CQ9Y520 2896 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 FAM237BA0A1B0GVD1 139 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 OR2A25A4D2G3 310 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CTAGE9A4FU28 777 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 MYO1CO00159 1063 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 TXNDC9O14530 226 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 SOCS6O14544 535 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 MAP2K7O14733 419 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 PCDH17O14917 1159 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 PSIP1O75475 530 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 EIF2S1P05198 315 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 ERGP11308 486 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 MLNP12872 115 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 PKMP14618 531 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 FBLP22087 321 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 KCNJ1P48048 391 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 GPS1Q13098 491 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 MRPL49Q13405 166 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 NR6A1Q15406 480 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 NEPROQ6NW34 567 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 NEK10Q6ZWH5 1172 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 LMNTD2Q8IXW0 634 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CISD2Q8N5K1 135 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 PRR7Q8TB68 274 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 RERGQ96A58 199 aaPredicted RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 MIEF2Q96C03 454 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 NAP1L3Q99457 506 aaPredicted RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 DPH7Q9BTV6 452 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 LHPPQ9H008 270 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 SOX17Q9H6I2 414 aaPredicted RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 C14orf105Q9NVL8 296 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 ASF1BQ9NVP2 202 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 KLHL42Q9P2K6 505 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 CTSFQ9UBX1 484 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 ZC3H7BQ9UGR2 993 aaKnown RBP14.17□□□□□ -0.14
CTSD-202ENST00000367196 PCDHGA10Q9Y5H3 936 aa14.17□□□□□ -0.14
CTSD-202ENST00000367196 A0A1W2PPV9 198 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 VSTM2BA6NLU5 285 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 GOLGA8KD6RF30 607 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 GOLGA8TH3BQL2 631 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 SEMA7AO75326 666 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 USP1O94782 785 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 ACPPP15309 386 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 OR1D4P47884 311 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 GLRBP48167 497 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 VPS41P49754 854 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 FOXL2P58012 376 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 DHX34Q14147 1143 aaKnown RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 TRIP13Q15645 432 aaPredicted RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 EIF2S3LQ2VIR3 472 aaKnown RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 KLHL38Q2WGJ6 581 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 CCSMST1Q4G0I0 132 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 B3GNTL1Q67FW5 361 aaPredicted RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 ZNF470Q6ECI4 717 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 FRMPD2BQ6IN97 320 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 KIRREL2Q6UWL6 708 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 METTL27Q8N6F8 245 aaPredicted RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 EBNA1BP2Q99848 306 aaKnown RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 PLCD4Q9BRC7 762 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 ACAT2Q9BWD1 397 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
CTSD-202ENST00000367196 COMMD10Q9Y6G5 202 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 MAU2Q9Y6X3 613 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 DOCK10Q96BY6 2186 aa14.16□□□□□ -0.14
CTSD-202ENST00000367196 TCRBV7S3A2A0A539 114 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ANKUB1A6NFN9 424 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 SDR42E2A6NKP2 422 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ARHGEF33A8MVX0 844 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 HPP00738 406 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 KRT14P02533 472 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ANXA5P08758 320 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ZGLP1P0C6A0 271 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ENO3P13929 434 aaPredicted RBP14.15□□□□□ -0.14
CTSD-202ENST00000367196 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
CTSD-202ENST00000367196 FDXRP22570 491 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 CXCR2P25025 360 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 CXCR5P32302 372 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 PNLIPRP1P54315 467 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 AP2B1P63010 937 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 ABATP80404 500 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 RELAQ04206 551 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 KLC1Q07866 573 aa14.15□□□□□ -0.14
CTSD-202ENST00000367196 TSTA3Q13630 321 aaPredicted RBP14.15□□□□□ -0.14
CTSD-202ENST00000367196 TLR1Q15399 786 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms