RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NOL11Q9H8H0 719 aaKnown RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRPV4Q9HBA0 871 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 DDX25Q9UHL0 483 aaKnown RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM169AQ9Y6X4 670 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ARPC2O15144 300 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 BECN1Q14457 450 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZNF74Q16587 644 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 C2CD6Q53TS8 623 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 TCTE1Q5JU00 501 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 PAQR6Q6TCH4 344 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZBTB49Q6ZSB9 765 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 TC2NQ8N9U0 490 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 NSMCE3Q96MG7 304 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 KRT12Q99456 494 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 LRRC61Q9BV99 259 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLC2A11Q9BYW1 496 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 ANKZF1Q9H8Y5 726 aa3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 CPSF3Q9UKF6 684 aaKnown RBP3.8□□□□□ -1.8
RNU4-28P-201ENST00000364739 A0A1W2PPK0 400 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 CCL24O00175 119 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 SOCS3O14543 225 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 IGHEP01854 428 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRIM49P0CI25 452 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRIM49CP0CI26 452 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 ACADSP16219 412 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 CD22P20273 847 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 SHC1P29353 583 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 CCR3P51677 355 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 NFATC2Q13469 925 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 PRR27Q6MZM9 219 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 GPRIN3Q6ZVF9 776 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 PLPPR4Q7Z2D5 763 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 SPEM1Q8N4L4 309 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 ANKRD13CQ8N6S4 541 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 MAPK15Q8TD08 544 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 ATP8B4Q8TF62 1192 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 GTF3AQ92664 365 aaKnown RBP3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 NKX3-1Q99801 234 aaPredicted RBP3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM49AQ9H0Q0 323 aaPredicted RBP3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 Q9H8V8 135 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 ANAPC2Q9UJX6 822 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
RNU4-28P-201ENST00000364739 EDDM13A0A1B0GTR0 161 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 KPNA7A9QM74 516 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 PI4K2BG5E9Z4 385 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 PTGESO14684 152 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 IDH3BO43837 385 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 DIAPH2O60879 1101 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLCO2B1O94956 709 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 VTNP04004 478 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 IRF2P14316 349 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CAPN2P17655 700 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 MC5RP33032 325 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 SOX3P41225 446 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 LHX1P48742 406 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CALCOCO2Q13137 446 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 ITGA7Q13683 1181 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 SNTB1Q13884 538 aaKnown RBP3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 PHKG1Q16816 387 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 GPR33Q49SQ1 333 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 GLIPR1L2Q4G1C9 344 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CFAP58Q5T655 872 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 LMNTD2Q8IXW0 634 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 Q8NBF4 154 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 AQP11Q8NBQ7 271 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLC37A3Q8NCC5 494 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 OR7A2PQ8NGA2 310 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 C11orf45Q8TAV5 145 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 GATAD1Q8WUU5 269 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 C4orf45Q96LM5 186 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 SPAG5Q96R06 1193 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CPNE1Q99829 537 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZMYND12Q9H0C1 365 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 C19orf25Q9UFG5 118 aaPredicted RBP3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CHKBQ9Y259 395 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 CSNK1G3Q9Y6M4 447 aa3.78□□□□□ -1.8
RNU4-28P-201ENST00000364739 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 CELF2O95319 508 aaKnown RBP3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 NR2F1P10589 423 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 RBMS1P29558 406 aaKnown RBP3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 DNA2P51530 1060 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 VAMP7P51809 220 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 COX10Q12887 443 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 RALGDSQ12967 914 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 CUL3Q13618 768 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 TMEM132DQ14C87 1099 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 MOGAT2Q3SYC2 334 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 TCTEX1D4Q5JR98 221 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 CES4AQ5XG92 561 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 LYSMD4Q5XG99 296 aa3.77□□□□□ -1.81
RNU4-28P-201ENST00000364739 SUSD1Q6UWL2 747 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms