RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 KBTBD12Q3ZCT8 623 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 FAM98BQ52LJ0 330 aaKnown RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 BOLA3Q53S33 107 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 ARMC4Q5T2S8 1044 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 C20orf194Q5TEA3 1177 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 HHATQ5VTY9 493 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 JADE1Q6IE81 842 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 IRGCQ6NXR0 463 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CFAP161Q6P656 301 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 SARM1Q6SZW1 724 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 TMEM207Q6UWW9 146 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 LEKR1Q6ZMV7 388 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CLEC17AQ6ZS10 378 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 MCM10Q7L590 875 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CATSPER4Q7RTX7 472 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CFAP206Q8IYR0 622 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CDK20Q8IZL9 346 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 SLC34A3Q8N130 599 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 NKAIN3Q8N8D7 197 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 ERMNQ8TAM6 284 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 GOLGA5Q8TBA6 731 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 SUN5Q8TC36 379 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 KIAA1524Q8TCG1 905 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 ATP8B4Q8TF62 1192 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 LRRC15Q8TF66 581 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 PHLDA1Q8WV24 401 aaPredicted RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 POMGNT1Q8WZA1 660 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 ZNF75CPQ92670 426 aaPredicted RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 TOMM40LQ969M1 308 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 ATP6V1E2Q96A05 226 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 LRRC45Q96CN5 670 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CFAP36Q96G28 342 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 EPSTI1Q96J88 318 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 AGAP4Q96P64 663 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CAPS2Q9BXY5 557 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 VCX3BQ9H321 246 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 MED20Q9H944 212 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 JMJD4Q9H9V9 463 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 GNB4Q9HAV0 340 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CHMP1AQ9HD42 196 aaPredicted RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 PPANQ9NQ55 473 aaKnown RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 MAN2C1Q9NTJ4 1040 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 OSER1Q9NX31 292 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 P4HTMQ9NXG6 502 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 NDE1Q9NXR1 346 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 OR6C2Q9NZP2 312 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CFDP1Q9UEE9 299 aaPredicted RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 TBK1Q9UHD2 729 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 RSPH14Q9UHP6 348 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CELA1Q9UNI1 258 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 TMEM98Q9Y2Y6 226 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 NOSIPQ9Y314 301 aaKnown RBP1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 SNX5Q9Y5X3 404 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 CSNK1G3Q9Y6M4 447 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 SESN1Q9Y6P5 492 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 EVC2Q86UK5 1308 aa1.88□□□□□ -2.11
RNU4-42P-201ENST00000364738 KDRP35968 1356 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 IGKV6D-21A0A0A0MT36 114 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 A0A1B0GUL7 405 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 LINC00854A0A1B0GVQ3 168 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 PI4K2BG5E9Z4 385 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 POLR3GO15318 223 aaPredicted RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SSX4O60224 188 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 DIAPH2O60879 1101 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 RNASEH1O60930 286 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 AVILO75366 819 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SEC24AO95486 1093 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 YEATS4O95619 227 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 THEGLP0DJG4 465 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SFTPCP11686 197 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 KRT13P13646 458 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 FOLR2P14207 255 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 RPS2P15880 293 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 DESP17661 470 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 PON1P27169 355 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 S100A5P33763 92 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 CTNNA1P35221 906 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 PPARGP37231 505 aaPredicted RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 MTHFRP42898 656 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 TSFMP43897 325 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 RPL21P46778 160 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 PSMD7P51665 324 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 MNAT1P51948 309 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 LBX1P52954 281 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 KRT83P78385 493 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 BECN1Q14457 450 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 KRT33BQ14525 404 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 RASA2Q15283 850 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 DLG2Q15700 870 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 CLPPQ16740 277 aaPredicted RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 MTHFSDQ2M296 383 aaKnown RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 PHLDA2Q53GA4 152 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SPDYCQ5MJ68 293 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SPATA1Q5VX52 437 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 KIAA0930Q6ICG6 404 aaPredicted RBP1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 SLC25A47Q6Q0C1 308 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 ABRAXAS1Q6UWZ7 409 aa1.87□□□□□ -2.11
RNU4-42P-201ENST00000364738 CATSPERDQ86XM0 798 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms