RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PARP15Q460N3 678 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 INO80DQ53TQ3 878 aaPredicted RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CERCAMQ5T4B2 595 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 ERAP2Q6P179 960 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 DNAJC24Q6P3W2 148 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 LVRNQ6Q4G3 990 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRIM72Q6ZMU5 477 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TAF8Q7Z7C8 310 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZFAND4Q86XD8 727 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF677Q86XU0 584 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 DNAAF5Q86Y56 855 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 SRRM1Q8IYB3 904 aaKnown RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CCL4L1Q8NHW4 92 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 NTAN1Q96AB6 310 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 SGF29Q96ES7 293 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 MCEEQ96PE7 176 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CLSTN2Q9H4D0 955 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 RETREG1Q9H6L5 497 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CATSPERBQ9H7T0 1116 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 FGF22Q9HCT0 170 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 GPATCH2LQ9NWQ4 482 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 UBA2Q9UBT2 640 aaPredicted RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 FZD10Q9ULW2 581 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 LOXL2Q9Y4K0 774 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 HEMK1Q9Y5R4 338 aaPredicted RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 RNF215Q9Y6U7 377 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CFAP46Q8IYW2 2715 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 BOD1L1Q8NFC6 3051 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 SDK2Q58EX2 2172 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 TSPAN11A1L157 253 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 A1L4Q6 167 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MBD3L4A6NDZ8 208 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MBD3L3A6NE82 208 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SIGLEC16A6NMB1 481 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ISM1B1AKI9 464 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMX2-CTNND1H3BSU7 103 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MYO1FO00160 1098 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CACNB4O00305 520 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 NVLO15381 856 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PRAMEF11O60813 436 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PALMO75781 387 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 RECQL5O94762 991 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 TJP3O95049 919 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CALB1P05937 261 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 LIPCP11150 499 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 EEF1GP26641 437 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CCKBRP32239 447 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 STAT1P42224 750 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PAPOLAP51003 745 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SUOXP51687 545 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAZP56270 477 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 OGDHQ02218 1023 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZFP36L1Q07352 338 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 RALGDSQ12967 914 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ARHGEF7Q14155 803 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 GRM3Q14832 879 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 C16orf72Q14CZ0 275 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ACOX1Q15067 660 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 KRT31Q15323 416 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 LLGL1Q15334 1064 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SYCP1Q15431 976 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CA9Q16790 459 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 AMZ1Q400G9 498 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAP9Q49MG5 647 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 C14orf28Q4W4Y0 310 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PLA1AQ53H76 456 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MANEAQ5SRI9 462 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DEPDC1Q5TB30 811 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DENND2CQ68D51 928 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SPECC1LQ69YQ0 1117 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DCUN1D2Q6PH85 259 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 BRAT1Q6PJG6 821 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 MON1BQ7L1V2 547 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SRLQ86TD4 932 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PHF13Q86YI8 300 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 UMODL1-AS1Q8N2C9 162 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PELI3Q8N2H9 469 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR6C4Q8NGE1 309 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 OR56A4Q8NGH8 313 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 R3HDM4Q96D70 268 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF641Q96N77 438 aaPredicted RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 CMKLR1Q99788 373 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 FSD1LQ9BXM9 530 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 SLC39A8Q9C0K1 460 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 NUP62CLQ9H1M0 184 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DPEP2Q9H4A9 486 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 LRRC19Q9H756 370 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ATP13A3Q9H7F0 1226 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 PDFQ9HBH1 243 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 RDH14Q9HBH5 336 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DUSP22Q9NRW4 184 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 APPL1Q9UKG1 709 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 DGKBQ9Y6T7 804 aa5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZFC3H1O60293 1989 aaKnown RBP5.14□□□□□ -1.59
RNU4-4P-201ENST00000364588 FLNBO75369 2602 aaKnown RBP5.13□□□□□ -1.59
RNU4-4P-201ENST00000364588 TCRBV5S1A1TA0A578 114 aa5.13□□□□□ -1.59
RNU4-4P-201ENST00000364588 CFAP69A5D8W1 941 aa5.13□□□□□ -1.59
RNU4-4P-201ENST00000364588 ARHGAP42A6NI28 874 aa5.13□□□□□ -1.59
RNU4-4P-201ENST00000364588 RHPN2P1A8MT19 583 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms