RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 ATP1A4Q13733 1029 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LAMB3Q13751 1172 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GTF2H3Q13889 308 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MPP2Q14168 576 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MAP7Q14244 749 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 IL11RAQ14626 422 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KIR2DS5Q14953 304 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NR1D2Q14995 579 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PAFAH1B3Q15102 231 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PDK1Q15118 436 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RBBP5Q15291 538 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TMED2Q15363 201 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZIC1Q15915 447 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DPYSL2Q16555 572 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DBN1Q16643 649 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PDK4Q16654 411 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 UGT8Q16880 541 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MUM1Q2TAK8 710 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DNAL1Q4LDG9 190 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ANKRD20A4Q4UJ75 823 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZRANB3Q5FWF4 1079 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SIRPB2Q5JXA9 342 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ANKRD20A2Q5SQ80 823 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 HP1BP3Q5SSJ5 553 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GPRC6AQ5T6X5 926 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 HENMT1Q5T8I9 393 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TEDDM1Q5T9Z0 273 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GRTP1Q5TC63 336 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ANKRD20A1Q5TYW2 823 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 C1QL3Q5VWW1 255 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLC6A19Q695T7 634 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FCRLBQ6BAA4 426 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TIGD7Q6NT04 549 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TCTN3Q6NUS6 607 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 JMJD6Q6NYC1 403 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TTC27Q6P3X3 843 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CASC4Q6P4E1 433 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TLDC1Q6P9B6 456 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TMEM154Q6P9G4 183 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 AAGABQ6PD74 315 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ABRAXAS1Q6UWZ7 409 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 XKR5Q6UX68 686 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MFSD7Q6UXD7 560 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TIFABQ6ZNK6 161 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LINC00696Q6ZRV3 163 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NCCRP1Q6ZVX7 275 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 BBS12Q6ZW61 710 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ASRGL1Q7L266 308 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NET1Q7Z628 596 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 C11orf96Q7Z7L8 435 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SDCCAG8Q86SQ7 713 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LINC00523Q86TU6 105 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LDB1Q86U70 411 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TRABD2AQ86V40 505 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LAPTM4BQ86VI4 370 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LCA5Q86VQ0 697 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FJX1Q86VR8 437 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 AMZ2Q86W34 360 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ANKMY2Q8IV38 441 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PSTKQ8IV42 348 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CDKL3Q8IVW4 592 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SCUBE1Q8IWY4 988 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CTAGE3PQ8IX95 158 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RAVER1Q8IY67 606 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KIRREL3Q8IZU9 778 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CYP4X1Q8N118 509 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TRAM1L1Q8N609 369 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CLDN19Q8N6F1 224 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZNF655Q8N720 491 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PLD5Q8N7P1 536 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PPM1NQ8N819 430 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NIPA2Q8N8Q9 360 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 BANPQ8N9N5 519 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 Q8NA96 180 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 AVL9Q8NBF6 648 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MCUQ8NE86 351 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FBXO36Q8NEA4 188 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 IPMKQ8NFU5 416 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 OR4K2Q8NGD2 314 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 OR13C4Q8NGS5 318 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DNAJB14Q8TBM8 379 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ACTL9Q8TC94 416 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TCP10LQ8TDR4 215 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ACMSDQ8TDX5 336 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 EPS8L3Q8TE67 593 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SSC4DQ8WTU2 575 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LCN9Q8WX39 176 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KLHL6Q8WZ60 621 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GFM2Q969S9 779 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FAM136AQ96C01 138 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 C8orf44Q96CB5 159 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZNF501Q96CX3 271 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SPDL1Q96EA4 605 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 IMP4Q96G21 291 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SCARF2Q96GP6 870 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZDHHC12Q96GR4 267 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 OXNAD1Q96HP4 312 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CNDP1Q96KN2 507 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MRGPRX2Q96LB1 330 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms