RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RPS2P15880 293 aaKnown RBP1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 PTPN3P26045 913 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 PKLRP30613 574 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 PBX3P40426 434 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 SLC9A3P48764 834 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 RIDAP52758 137 aaKnown RBP1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 CDK3Q00526 305 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 TLE4Q04727 773 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 UPP1Q16831 310 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 PHLDA2Q53GA4 152 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 GPR157Q5UAW9 335 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 CYP26C1Q6V0L0 522 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 LDHAL6AQ6ZMR3 332 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 FAM114A1Q8IWE2 563 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARHGAP24Q8N264 748 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR52B6Q8NGF0 335 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 KIR2DL5BQ8NHK3 375 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 ETNPPLQ8TBG4 499 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 C4orf45Q96LM5 186 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 C1orf74Q96LT6 269 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 DGAT2Q96PD7 388 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 GAD1Q99259 594 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 CCDC28BQ9BUN5 200 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 PDCL3Q9H2J4 239 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 CHMP1AQ9HD42 196 aaPredicted RBP1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 SETD4Q9NVD3 440 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZHX1Q9UKY1 873 aaPredicted RBP1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 KCNE2Q9Y6J6 123 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 FAM237BA0A1B0GVD1 139 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 PDHXO00330 501 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 TLX2O43763 284 aaPredicted RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR10H2O60403 315 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 TSPAN1O60635 241 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 MTRF1O75570 445 aaKnown RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 GIG44P09565 113 aaPredicted RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 DARSP14868 501 aaKnown RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 PSMA4P25789 261 aaKnown RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZNF133P52736 654 aaPredicted RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 NDUFV3P56181 108 aaKnown RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 WNT4P56705 351 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 ERVPABLB-1P60509 514 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 PRAMEP78395 509 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 ACY1Q03154 408 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 KLC1Q07866 573 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 KIAA0141Q14154 515 aaPredicted RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 NCEH1Q6PIU2 408 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 FCRLAQ7L513 359 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 SCYL3Q8IZE3 742 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR11H4Q8NGC9 324 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 POMGNT1Q8WZA1 660 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 SLC22A18Q96BI1 424 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 CCDC34Q96HJ3 373 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 C2orf48Q96LS8 159 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 WDFY2Q96P53 400 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 DPAGT1Q9H3H5 408 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 MARCH7Q9H992 704 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 CYTL1Q9NRR1 136 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 GKN1Q9NS71 199 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 PRDM4Q9UKN5 801 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 PCDH11YQ9BZA8 1340 aa1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZNF644Q9H582 1327 aaPredicted RBP1.29□□□□□ -2.2
RNU6-238P-201ENST00000363313 SNURFLB1AK76 121 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 F8VVB4 439 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 F8VWA3 439 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 RSL1D1O76021 490 aaKnown RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 MDKP21741 143 aaPredicted RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARSEP51690 589 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 TRIM29Q14134 588 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 TMEM132DQ14C87 1099 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 EXT1Q16394 746 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 FAM98BQ52LJ0 330 aaKnown RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 LRRC49Q8IUZ0 686 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 CEP57L1Q8IYX8 460 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 Q8N9L7 120 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR7A2PQ8NGA2 310 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZKSCAN4Q969J2 545 aaPredicted RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 C11orf52Q96A22 123 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 ELMOD3Q96FG2 381 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 LRRCC1Q9C099 1032 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 PLK3Q9H4B4 646 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 VNN3Q9NY84 501 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 NLGN3Q9NZ94 848 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 RPS6KB2Q9UBS0 482 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 BAIAP2L1Q9UHR4 511 aa1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 DHX57Q6P158 1386 aaKnown RBP1.28□□□□□ -2.2
RNU6-238P-201ENST00000363313 XRCC3O43542 346 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 LYPD3O95274 346 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 ACSL3O95573 720 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 XBP1P17861 261 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 AADACP22760 399 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 TRAPPC10P48553 1259 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 CAMPP49913 170 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 SIRPAP78324 504 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 TRA2AQ13595 282 aaKnown RBP eCLIP1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 ITGA7Q13683 1181 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 SIX1Q15475 284 aaPredicted RBP1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 TIMM50Q3ZCQ8 353 aa1.27□□□□□ -2.21
RNU6-238P-201ENST00000363313 ACAD10Q6JQN1 1059 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms