RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MYOD1P15172 320 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF12P17014 697 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 NOVP48745 357 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 PEX5P50542 639 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 RUNX1T1Q06455 604 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 TROAPQ12815 778 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 HYAL4Q2M3T9 481 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM31Q5JXX7 168 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 RNASEH2BQ5TBB1 312 aaKnown RBP5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 DCLRE1AQ6PJP8 1040 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 SUSD1Q6UWL2 747 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 ADHFE1Q8IWW8 467 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 ODF3L1Q8IXM7 274 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 RNF113BQ8IZP6 322 aaKnown RBP5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 CAMKVQ8NCB2 501 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 CLEC18CQ8NCF0 446 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR2AJ1Q8NGZ0 328 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR52I2Q8NH67 350 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC20A1Q8WUM9 679 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 FAM81BQ96LP2 452 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF582Q96NG8 517 aaPredicted RBP5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 FCRL4Q96PJ5 515 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 GBP5Q96PP8 586 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZWILCHQ9H900 591 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 HHATLQ9HCP6 504 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 PFDN4Q9NQP4 134 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM30AQ9NV96 361 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 SMARCAL1Q9NZC9 954 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 RHCGQ9UBD6 479 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 KCNS2Q9ULS6 477 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 Q9Y3F1 56 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 PRRC2BQ5JSZ5 2229 aaKnown RBP5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 CDK5RAP2Q96SN8 1893 aa5.37□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR5K3A6NET4 321 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ANKUB1A6NFN9 424 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 LILRA5A6NI73 299 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ASB14A6NK59 587 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 RNF113AO15541 343 aaKnown RBP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 XRCC3O43542 346 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 WISP2O76076 250 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 PCGF2P35227 344 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 GP5P40197 560 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ISL1P61371 349 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 HNRNPKP61978 463 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 DEFB103AP81534 67 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 HSPB3Q12988 150 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 NR1D2Q14995 579 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 VWC2Q2TAL6 325 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF260Q3ZCT1 412 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 KLHL26Q53HC5 615 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 C20orf194Q5TEA3 1177 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 KRT39Q6A163 491 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 TRAT1Q6PIZ9 186 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 RAD9BQ6WBX8 426 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ERN2Q76MJ5 926 aaKnown RBP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMPRSS12Q86WS5 348 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 FBXL14Q8N1E6 418 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 KBTBD3Q8NAB2 608 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 EXD1Q8NHP7 514 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 PHOSPHO2Q8TCD6 241 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM19Q96HH6 336 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 LRMDAQ9H2I8 198 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 MTIF3Q9H2K0 278 aaKnown RBP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLA2Q9H6Q3 261 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 TBC1D17Q9HA65 648 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 GRPEL1Q9HAV7 217 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC24A2Q9UI40 661 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 FOCADQ5VW36 1801 aa5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 MYO5AQ9Y4I1 1855 aaKnown RBP5.36□□□□□ -1.55
RNU4-39P-201ENST00000362455 PLIN4Q96Q06 1357 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 PRSS51A0A1B0GVH4 220 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 FEZF1A0PJY2 475 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 FAM90A10PA6NDY2 464 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SRRM3A6NNA2 597 aaPredicted RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 MED24O75448 989 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 PMS2P2O95744 297 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 IL9P15248 144 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 POLR2CP19387 275 aaPredicted RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 ACHEP22303 614 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC1A4P43007 532 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 NPY4RP50391 375 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 RBP5P82980 135 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC20A2Q08357 652 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 PTPRCAPQ14761 206 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 TMEM35AQ53FP2 167 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 GCNT6Q5T4J0 391 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 GFRALQ6UXV0 394 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 METTL23Q86XA0 190 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 OR8H3Q8N146 312 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 TTC30BQ8N4P2 665 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 RBMXL3Q8N7X1 1067 aaKnown RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SLC4A11Q8NBS3 891 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 PAPD5Q8NDF8 572 aaKnown RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 CHURC1Q8WUH1 139 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 SMG7Q92540 1137 aaKnown RBP5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 ATP6V1E2Q96A05 226 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 PHF21BQ96EK2 531 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 TTC14Q96N46 770 aa5.35□□□□□ -1.55
RNU4-39P-201ENST00000362455 MTG1Q9BT17 334 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms