RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ATG16L2Q8NAA4 619 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 FAM83FQ8NEG4 500 aaPredicted RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 PPP1R14BQ96C90 147 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 ARL15Q9NXU5 204 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 BTBD3Q9Y2F9 522 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 KIAA1549LQ6ZVL6 1849 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 A6NL46 340 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 KDM1AO60341 852 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 SPNP16150 400 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 GRK5P34947 590 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 OR1D2P34982 312 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 HNF1BP35680 557 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 LIPAP38571 399 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 RING1Q06587 406 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 EPS8Q12929 822 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 ZNF846Q147U1 533 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 ZNF648Q5T619 568 aaPredicted RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 FAM180BQ6P0A1 224 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 MTERF1Q99551 399 aaKnown RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
SMC3-201ENST00000361804 MARCH7Q9H992 704 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 CRLS1Q9UJA2 301 aa10.29□□□□□ -0.76
SMC3-201ENST00000361804 RFXANKO14593 260 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 RECQL5O94762 991 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 GABARAPO95166 117 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SEC24AO95486 1093 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 EPB42P16452 691 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 CLCN4P51793 760 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SLC35A2P78381 396 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ZBTB2Q8N680 514 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 BEND7Q8N7W2 519 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 TTC29Q8NA56 475 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 CNDP2Q96KP4 475 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 MROQ9BYG7 248 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SIAEQ9HAT2 523 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ZFYVE1Q9HBF4 777 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ZNF229Q9UJW7 825 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 RIMKLBQ9ULI2 386 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SAMHD1Q9Y3Z3 626 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 NINQ8N4C6 2090 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ZNF840PA6NDX5 716 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SCELO95171 688 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 NRIP1P48552 1158 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 TPTEP56180 551 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 BTG3Q14201 252 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 FUT10Q6P4F1 479 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 PIH1D2Q8WWB5 315 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 MAGED4Q96JG8 741 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 REXO4Q9GZR2 422 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 MAGEE1Q9HCI5 957 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 HMG20AQ9NP66 347 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 USE1Q9NZ43 259 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SLC22A14Q9Y267 594 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 OARD1Q9Y530 152 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 TNPO3Q9Y5L0 923 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 ORC6Q9Y5N6 252 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 TBX1O43435 398 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SSX4O60224 188 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 STK16O75716 305 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 PGLSO95336 258 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 GSTT2P0CG29 244 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 GSTT2BP0CG30 244 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 DBTP11182 482 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 CD36P16671 472 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ENGP17813 658 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 HMGCLP35914 325 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 MAGEA11P43364 429 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 BOP1Q14137 746 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 CALHM3Q86XJ0 350 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 NLGN4XQ8N0W4 816 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SVOPLQ8N434 492 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 GPR26Q8NDV2 337 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 SLC35B4Q969S0 331 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 MYO19Q96H55 970 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 TRIT1Q9H3H1 467 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 RC3H2Q9HBD1 1191 aaKnown RBP10.28□□□□□ -0.76
SMC3-201ENST00000361804 AASDHPPTQ9NRN7 309 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
SMC3-201ENST00000361804 LOC100506127A0A0U1RQW1 187 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 TTC34A8MYJ7 566 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 CLDN11O75508 207 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 WBP4O75554 376 aaKnown RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 GBAP04062 536 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 ALDH2P05091 517 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 IL6P05231 212 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 UGT2B4P06133 528 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 ZNF7P17097 686 aaPredicted RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 TGM1P22735 817 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 OR1E2P47887 323 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 STK19P49842 368 aaPredicted RBP10.27□□□□□ -0.76
SMC3-201ENST00000361804 CCL23P55773 120 aa10.27□□□□□ -0.76
SMC3-201ENST00000361804 GPR17Q13304 367 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms