RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TAC3Q9UHF0 121 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 MID2Q9UJV3 735 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 SNX7Q9UNH6 387 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 NEUROG3Q9Y4Z2 214 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 KCNE2Q9Y6J6 123 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 SPEGQ15772 3267 aa13.32□□□□□ -0.28
NSMCE1-201ENST00000361439 COL27A1Q8IZC6 1860 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 UBXN8O00124 270 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PLD2O14939 933 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 TAPBPO15533 448 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 KIF1CO43896 1103 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 MPSTP25325 297 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 GRIA3P42263 894 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 LSSP48449 732 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PIK3CGP48736 1102 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 RAB15P59190 212 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 SHC2P98077 582 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 ACY1Q03154 408 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PFKFB4Q16877 469 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 TAX1BP1Q86VP1 789 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 THOC6Q86W42 341 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 LSMEM2Q8N112 164 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 C4orf33Q8N1A6 199 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 C19orf47Q8N9M1 422 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 ABHD11Q8NFV4 315 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 OR8K5Q8NH50 307 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 C1QTNF3Q9BXJ4 246 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 ACBD3Q9H3P7 528 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 TMBIM4Q9HC24 238 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 FBXO8Q9NRD0 319 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 ENAMQ9NRM1 1142 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 PLLPQ9Y342 182 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 LOXL2Q9Y4K0 774 aa13.31□□□□□ -0.28
NSMCE1-201ENST00000361439 OR2A25A4D2G3 310 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SLC9B1P1A6NJY1 282 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 TK2O00142 265 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 TYROBPO43914 113 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 PLIN3O60664 434 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SBK3P0C264 359 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 EZRP15311 586 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 GNAZP19086 355 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SLC18A1P54219 525 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 FOXC1Q12948 553 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 TSTA3Q13630 321 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 IL11RAQ14626 422 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ZC3H12BQ5HYM0 836 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 KIAA1614Q5VZ46 1190 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ZNF425Q6IV72 752 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 FIGLAQ6QHK4 219 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 CDHR3Q6ZTQ4 885 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 RCBTB1Q8NDN9 531 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 EXT2Q93063 718 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 PLCD4Q9BRC7 762 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ZPBPQ9BS86 351 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 TMEM79Q9BSE2 394 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SARGQ9BW04 601 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ACAT2Q9BWD1 397 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 EHD1Q9H4M9 534 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 POLR1BQ9H9Y6 1135 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 FANCEQ9HB96 536 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SOHLH2Q9NX45 425 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 CPSF2Q9P2I0 782 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 SLC22A14Q9Y267 594 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 MSRB2Q9Y3D2 182 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 DYRK1BQ9Y463 629 aa13.3□□□□□ -0.28
NSMCE1-201ENST00000361439 A8MU76 341 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 K7EPI3 171 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 AGPSO00116 658 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 TM9SF1O15321 606 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■□□ 16.3
NSMCE1-201ENST00000361439 ATP8B1O43520 1251 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 KATNA1O75449 491 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 WDR47O94967 919 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 PROCP04070 461 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 JMJD7P0C870 316 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 EPB42P16452 691 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 MAGP20916 626 aa13.29□□□□□ -0.28
NSMCE1-201ENST00000361439 CXCR2P25025 360 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms