RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 DYTNA2CJ06 578 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 ERI2A8K979 691 aaKnown RBP20.13■□□□□ 0.81
CD47-202ENST00000361309 PCDH17O14917 1159 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 USP1O94782 785 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 PRR35P0CG20 571 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 BDKRB1P46663 353 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 TDGF1P3P51864 188 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 CCSMST1Q4G0I0 132 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 VWA2Q5GFL6 755 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 LAPTM4BQ86VI4 370 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 OR2L3Q8NG85 312 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 BRIX1Q8TDN6 353 aaKnown RBP20.13■□□□□ 0.81
CD47-202ENST00000361309 PSMF1Q92530 271 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 TRIM5Q9C035 493 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 TTC7AQ9ULT0 858 aaPredicted RBP20.13■□□□□ 0.81
CD47-202ENST00000361309 TCAF1Q9Y4C2 921 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 KLK4Q9Y5K2 254 aa20.13■□□□□ 0.81
CD47-202ENST00000361309 CSMD2Q7Z408 3487 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 PRMT5O14744 637 aaPredicted RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 SUN1O94901 812 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 C1orf105O95561 183 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 COX6A1P12074 109 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 PTMSP20962 102 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 SOX11P35716 441 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 TNFSF10P50591 281 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 AARS2Q5JTZ9 985 aaKnown RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 PTRHD1Q6GMV3 140 aaKnown RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 RNF44Q7L0R7 432 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 NDUFAF7Q7L592 441 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 PEX26Q7Z412 305 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 RAB42Q8N4Z0 105 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 SIRT6Q8N6T7 355 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 OR2A1Q8NGT9 310 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 GSDMBQ8TAX9 411 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 SKA2Q8WVK7 121 aaPredicted RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 NR4A3Q92570 626 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 MARCH4Q9P2E8 410 aaPredicted RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 ANAPC5Q9UJX4 755 aa20.12■□□□□ 0.81
CD47-202ENST00000361309 RUVBL2Q9Y230 463 aaKnown RBP20.12■□□□□ 0.81
CD47-202ENST00000361309 IGLV3-12A0A075B6K2 115 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 TRAV17A0A0B4J275 112 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 IPO7O95373 1038 aaKnown RBP20.11■□□□□ 0.81
CD47-202ENST00000361309 FBLP22087 321 aaKnown RBP20.11■□□□□ 0.81
CD47-202ENST00000361309 GRNP28799 593 aaKnown RBP20.11■□□□□ 0.81
CD47-202ENST00000361309 YBX1P67809 324 aaKnown RBP20.11■□□□□ 0.81
CD47-202ENST00000361309 MUM1Q2TAK8 710 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 HMGCLL1Q8TB92 370 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 ATG4AQ8WYN0 398 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 HAS2Q92819 552 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 C10orf90Q96M02 699 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 RUBCNLQ9H714 662 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 CATSPERZQ9NTU4 200 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 CELSR1Q9NYQ6 3014 aa20.11■□□□□ 0.81
CD47-202ENST00000361309 A0A1W2PPV9 198 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 IDSB3KWA1 339 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 E7EVH7 732 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 FFAR3O14843 346 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 GPR42O15529 346 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 F10P00742 488 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 SERPINA7P05543 415 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 ERVK-10P10266 1014 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 FDFT1P37268 417 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 EMP2P54851 167 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 EEF1A2Q05639 463 aaKnown RBP20.1■□□□□ 0.81
CD47-202ENST00000361309 ART3Q13508 389 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 INAQ16352 499 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 CNSTQ6PJW8 725 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 GFRALQ6UXV0 394 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 ACRBPQ8NEB7 543 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 ITLN2Q8WWU7 325 aaPredicted RBP20.1■□□□□ 0.81
CD47-202ENST00000361309 MRFAP1L1Q96HT8 127 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 CABS1Q96KC9 395 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 PANX3Q96QZ0 392 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 PANX2Q96RD6 677 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 ZFYVE21Q9BQ24 234 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 YIPF2Q9BWQ6 316 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 P2RY12Q9H244 342 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 F8P00451 2351 aa20.1■□□□□ 0.81
CD47-202ENST00000361309 ADGRG4Q8IZF6 3080 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 OR2A25A4D2G3 310 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 CD3EAPO15446 510 aaKnown RBP20.09■□□□□ 0.81
CD47-202ENST00000361309 IFNB1P01574 187 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 UQCRHP07919 91 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 CELA2AP08217 269 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 FDXRP22570 491 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 CXCR2P25025 360 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 STIP1P31948 543 aaKnown RBP20.09■□□□□ 0.81
CD47-202ENST00000361309 TTPAP49638 278 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 SRSF11Q05519 484 aaKnown RBP20.09■□□□□ 0.81
CD47-202ENST00000361309 FASTKQ14296 549 aaKnown RBP20.09■□□□□ 0.81
CD47-202ENST00000361309 PRTGQ2VWP7 1150 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 FAAH2Q6GMR7 532 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 FBXO42Q6P3S6 717 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 RAD9BQ6WBX8 426 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 OTOAQ7RTW8 1153 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 PEX13Q92968 403 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 DPH7Q9BTV6 452 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 ACAT2Q9BWD1 397 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms