RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MLLT10P55197 1068 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 COL21A1Q96P44 957 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 NMUR2Q9GZQ4 415 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 SLC2A4RGQ9NR83 387 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 RAB21Q9UL25 225 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 TSHRP16473 764 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 HTR7P34969 479 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 ABATP80404 500 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 LRTOMTQ8WZ04 291 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 SALL4Q9UJQ4 1053 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 OR1A2Q9Y585 309 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 FEZF1A0PJY2 475 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 UNC5CO95185 931 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 IDH3AP50213 366 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 HHIPQ96QV1 700 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 TTYH2Q9BSA4 534 aa19.8■□□□□ 0.76
CDC42BPB-201ENST00000361246 C14orf80Q86SX3 495 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 FAM47BQ8NA70 645 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 GPATCH1Q9BRR8 931 aaKnown RBP19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 LOC100509620A0A075B734 347 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 MBOAT1Q6ZNC8 495 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 TMEM151BQ8IW70 566 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 PRICKLE1Q96MT3 831 aaPredicted RBP19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 AP4B1Q9Y6B7 739 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 CXCR6O00574 342 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 SNX4O95219 450 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 GOLGA4Q13439 2230 aaKnown RBP19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 KMOO15229 486 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 BRAT1Q6PJG6 821 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 PCDHGA6Q9Y5G7 932 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 C11orf98E9PRG8 122 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 J3QRK9 145 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 MTHFD1P11586 935 aaKnown RBP19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 RFTN1Q14699 578 aaPredicted RBP19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 CRELD1Q96HD1 420 aa19.79■□□□□ 0.76
CDC42BPB-201ENST00000361246 IGKV6D-41A0A0C4DH26 115 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 A0A1W2PQ72 361 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 FAM221BA6H8Z2 402 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ZNF879B4DU55 563 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 PFKMP08237 780 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 DLG1Q12959 904 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 PRKD1Q15139 912 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 IDNKQ5T6J7 187 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 CEP97Q8IW35 865 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 MEIOBQ8N635 442 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 AMER2Q8N7J2 671 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 TRIM63Q969Q1 353 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ADAD1Q96M93 576 aaKnown RBP19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 PKP4Q99569 1192 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 SLC45A1Q9Y2W3 748 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 PRKAR1AP10644 381 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ZNF267Q14586 743 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 OR4F3Q6IEY1 312 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 CHRDL2Q6WN34 429 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 OR2T34Q8NGX1 318 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 OR2T3Q8NH03 318 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 AP3S1Q92572 193 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 TRIM39Q9HCM9 518 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 LINGO2Q7L985 606 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ZNF461Q8TAF7 563 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ILVBLA1L0T0 632 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 SCO2O43819 266 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 DRD4P21917 467 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 NFKBIDQ8NI38 313 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 C12orf42Q96LP6 360 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 LRMDAQ9H2I8 198 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 WASHC1A8K0Z3 465 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 BBIP1A8MTZ0 92 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 WASH3PC4AMC7 463 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 OR7A10O76100 309 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ELOCQ15369 112 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 FAM69BQ5VUD6 431 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 WASH2PQ6VEQ5 465 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 NUDT13Q86X67 352 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 IRF2BP1Q8IU81 584 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 LENG8Q96PV6 779 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 MYH10P35580 1976 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 KDELR3O43731 214 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 EIPR1Q53HC9 387 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 ZDHHC21Q8IVQ6 265 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 KLHL6Q8WZ60 621 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 SPHK2Q9NRA0 654 aa19.78■□□□□ 0.76
CDC42BPB-201ENST00000361246 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 FMO3P31513 532 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 LMAN2Q12907 356 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 ECH1Q13011 328 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 ZNF384Q8TF68 577 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 TRIM2Q9C040 744 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 FZD4Q9ULV1 537 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 BNIP1Q12981 228 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 SLC13A3Q8WWT9 602 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 C17orf62Q9BQA9 187 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 RUVBL1Q9Y265 456 aaKnown RBP19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 SPIN3Q5JUX0 258 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 GPR153Q6NV75 609 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 SYVN1Q86TM6 617 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 CDKN2AIPNLQ96HQ2 116 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 CHCHD6Q9BRQ6 235 aa19.77■□□□□ 0.76
CDC42BPB-201ENST00000361246 VPS29Q9UBQ0 182 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms