RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SLC35A5Q9BS91 424 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 ABCG2Q9UNQ0 655 aa13.62□□□□□ -0.23
SMC5-201ENST00000361138 HCRTO43612 131 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 AGTR2P50052 363 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TUSC3Q13454 348 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ANKDD1AQ495B1 522 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ATG9BQ674R7 924 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CARM1Q86X55 608 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TOMM5Q8N4H5 51 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TIFAQ96CG3 184 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 OR14I1A6ND48 311 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ISM1B1AKI9 464 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ATG13O75143 517 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CDK14O94921 469 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CSF2P04141 144 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 GGT1P19440 569 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CORO1AP31146 461 aaKnown RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 HNRNPA0Q13151 305 aaKnown RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 RPA4Q13156 261 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 KRT77Q7Z794 578 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ARRDC4Q8NCT1 418 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 PIGKQ92643 395 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 C1QTNF1Q9BXJ1 281 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 SLA2Q9H6Q3 261 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 FNIP2Q9P278 1114 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 HEMK1Q9Y5R4 338 aaPredicted RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 J3KR12 359 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CD40LGP29965 261 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 SLC36A3Q495N2 470 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ENPP6Q6UWR7 440 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TNFAIP8L1Q8WVP5 186 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TSGA13Q96PP4 275 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 TMED9Q9BVK6 235 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 UCK2Q9BZX2 261 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CHURC1-FNTBB4DL54 471 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ACSL4O60488 711 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 FUT4P22083 530 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 DCKP27707 260 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 STC1P52823 247 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CLDN10P78369 228 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 JAG1P78504 1218 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 HSPB3Q12988 150 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 EXOSC8Q96B26 276 aaKnown RBP13.61□□□□□ -0.23
SMC5-201ENST00000361138 WACQ9BTA9 647 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ASPNQ9BXN1 380 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 LRRC70Q7Z2Q7 622 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 AP2M1Q96CW1 435 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ERVK13-1Q9NX77 482 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
SMC5-201ENST00000361138 ENTPD6O75354 484 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 PRKCGP05129 697 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 ZNF267Q14586 743 aaPredicted RBP13.6□□□□□ -0.23
SMC5-201ENST00000361138 POM121L1PQ3SYA9 428 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 SNX20Q7Z614 316 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 SLC43A3Q8NBI5 491 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 SCAMP5Q8TAC9 235 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 RHBGQ9H310 441 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 NMUR1Q9HB89 426 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 TCRBV3S1A0A5B6 114 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 ZSCAN5BA6NJL1 495 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 RIIAD1A6NNX1 92 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 KDM4BO94953 1096 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 RAB36O95755 333 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 HIST1H2ABP04908 130 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 IFNA16P05015 189 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 DEFA5Q01523 94 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 RHAGQ02094 409 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 ST3GAL4Q11206 333 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 LBX2Q6XYB7 198 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 HIST3H2AQ7L7L0 130 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 FAM46DQ8NEK8 389 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 HIST1H2ACQ93077 130 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 KLRG1Q96E93 195 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 GTPBP2Q9BX10 602 aaKnown RBP13.6□□□□□ -0.23
SMC5-201ENST00000361138 BEX2Q9BXY8 128 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 PPP2R2BQ00005 443 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 EQTNQ9NQ60 294 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 FCF1Q9Y324 198 aaKnown RBP13.6□□□□□ -0.23
SMC5-201ENST00000361138 ARL5CA6NH57 179 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 AP1G1O43747 822 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 GNAO1P09471 354 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 NR4A2P43354 598 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
SMC5-201ENST00000361138 RAB6CQ53S08 254 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 NFKBIDQ8NI38 313 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 RAB6CQ9H0N0 254 aa13.6□□□□□ -0.23
SMC5-201ENST00000361138 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms