RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 PCBD2Q9H0N5 130 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 OR6C2Q9NZP2 312 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 CACNA1HO95180 2353 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 A0A1W2PPV9 198 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 TRPC5OSA6NMA1 111 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 FFAR3O14843 346 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 GPR42O15529 346 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 NOBOXO60393 691 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 BTKQ06187 659 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 TCEAL6Q6IPX3 200 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 ZNF761Q86XN6 746 aaPredicted RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 GATAD2AQ86YP4 633 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 DDIASQ8IXT1 998 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 ARL14Q8N4G2 192 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 SLC5A11Q8WWX8 675 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 TCEAL3Q969E4 200 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 EBF4Q9BQW3 602 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 BTRCQ9Y297 605 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 HGSO14964 777 aaPredicted RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 DFNA5O60443 496 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 PRAMEF4O60810 478 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 CER1O95813 267 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 CHRM5P08912 532 aaPredicted RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 IDH3AP50213 366 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 DOC2AQ14183 400 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 CPSF6Q16630 551 aaKnown RBP eCLIP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 UGT3A2Q3SY77 523 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 TCHHL1Q5QJ38 904 aaPredicted RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 PRAMEF9Q5VWM5 478 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 EPGNQ6UW88 154 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 TMEM26Q6ZUK4 368 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 EFL1Q7Z2Z2 1120 aaKnown RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 C17orf64Q86WR6 236 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 OR10G6Q8NH81 332 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 PRR11Q96HE9 360 aaPredicted RBP21.12■□□□□ 0.97
HOXA4-201ENST00000360046 RILPQ96NA2 401 aa21.12■□□□□ 0.97
HOXA4-201ENST00000360046 UGDHO60701 494 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 ATXN3P54252 364 aaPredicted RBP21.11■□□□□ 0.97
HOXA4-201ENST00000360046 SLC9B1Q4ZJI4 515 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 CATSPEREQ5SY80 951 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 C6orf132Q5T0Z8 1188 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 SLCO4C1Q6ZQN7 724 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 L3MBTL4Q8NA19 623 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 KYQ8NBH2 561 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 C19orf60Q96EN9 201 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 MAGEB10Q96LZ2 347 aaPredicted RBP21.11■□□□□ 0.97
HOXA4-201ENST00000360046 PCDH15Q96QU1 1955 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 SLC29A3Q9BZD2 475 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 FAM86C1Q9NVL1 165 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 SPHK1Q9NYA1 384 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 PCDHB11Q9Y5F2 797 aa21.11■□□□□ 0.97
HOXA4-201ENST00000360046 GOLGA4Q13439 2230 aaKnown RBP21.11■□□□□ 0.97
HOXA4-201ENST00000360046 GOLGA8QA0A0J9YX86 632 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 GOLGA8OA6NCC3 632 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 OR6C74A6NCV1 312 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 ISM1B1AKI9 464 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 GOLGA8NF8WBI6 632 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 BTN3A3O00478 584 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 PIP5K1BO14986 540 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 YKT6O15498 198 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 WFS1O76024 890 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 RETP07949 1114 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 CDH1P12830 882 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 ENGP17813 658 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 VARSP26640 1264 aaKnown RBP21.1■□□□□ 0.97
HOXA4-201ENST00000360046 FASLGP48023 281 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 GGTA1PQ4G0N0 100 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 C14orf28Q4W4Y0 310 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.1■□□□□ 0.97
HOXA4-201ENST00000360046 LIPJQ5W064 366 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 OGFOD3Q6PK18 319 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 SUMF1Q8NBK3 374 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 CCT6BQ92526 530 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 WDR55Q9H6Y2 383 aaPredicted RBP21.1■□□□□ 0.97
HOXA4-201ENST00000360046 APOBEC2Q9Y235 224 aaKnown RBP21.1■□□□□ 0.97
HOXA4-201ENST00000360046 PTGDR2Q9Y5Y4 395 aa21.1■□□□□ 0.97
HOXA4-201ENST00000360046 PPM1DO15297 605 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 CD22P20273 847 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 EPHA3P29320 983 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 PEBP1P30086 187 aaKnown RBP21.09■□□□□ 0.97
HOXA4-201ENST00000360046 CCT8P50990 548 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 YBX1P67809 324 aaKnown RBP21.09■□□□□ 0.97
HOXA4-201ENST00000360046 ICE2Q659A1 982 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 SCIMPQ6UWF3 145 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 NXPE4Q6UWF7 544 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 ZNF771Q7L3S4 317 aaPredicted RBP21.09■□□□□ 0.97
HOXA4-201ENST00000360046 ADGRF3Q8IZF5 1079 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 GPR156Q8NFN8 814 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 OR2A1Q8NGT9 310 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 PTCD3Q96EY7 689 aaKnown RBP21.09■□□□□ 0.97
HOXA4-201ENST00000360046 TBC1D10AQ9BXI6 508 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 TUBB1Q9H4B7 451 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 MEAF6Q9HAF1 191 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 PIPSLA2A3N6 862 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 GSAPA4D1B5 854 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 LINC00032P0C843 101 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 C1GALT1C1LP0DN25 315 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 JUPP14923 745 aa21.09■□□□□ 0.97
HOXA4-201ENST00000360046 POLR2CP19387 275 aaPredicted RBP21.09■□□□□ 0.97
HOXA4-201ENST00000360046 HNF4AP41235 474 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms