RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 C1QTNF3Q9BXJ4 246 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ACTR8Q9H981 624 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RNPEPL1Q9HAU8 725 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 INTS7Q9NVH2 962 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SMOXQ9NWM0 555 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FBXL12Q9NXK8 326 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 OBP2AQ9NY56 170 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF490Q9ULM2 529 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ZFR2Q9UPR6 939 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 USP22Q9UPT9 525 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PIAS3Q9Y6X2 628 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ARHGEF17Q96PE2 2063 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ASPDHA6ND91 283 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 E7EQ34 232 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 H0Y8X5 98 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 H3BM21 787 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MRASO14807 208 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HAT1O14929 419 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HNRNPRO43390 633 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 NUAK1O60285 661 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LILRB5O75023 590 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 POP7O75817 140 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CIB2O75838 187 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LRATO95237 230 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PAPLNO95428 1278 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PSMG1O95456 288 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 OTCP00480 354 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PDYNP01213 254 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FTH1P02794 183 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SNRPB2P08579 225 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HIST1H2AGP0C0S8 130 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HOXB2P14652 356 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SLC2A4P14672 509 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 EPB42P16452 691 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CD22P20273 847 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HIST1H2ADP20671 130 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 EFNA1P20827 205 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PRKACBP22694 351 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PRLHRP49683 370 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RAP1GDS1P52306 607 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CLDN2P57739 230 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 STX1BP61266 288 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RPS14P62263 151 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PPP2CBP62714 309 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PPP2CAP67775 309 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ELP6Q0PNE2 266 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 GBX1Q14549 363 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 STARD3Q14849 445 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 IRF4Q15306 451 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 AP5B1Q2VPB7 878 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ANKDD1AQ495B1 522 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 XKR7Q5GH72 579 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MIER2Q8N344 545 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FBXW8Q8N3Y1 598 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 KRTCAP2Q8N6L1 136 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SLC26A7Q8TE54 656 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 JPH3Q8WXH2 748 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HIST1H2AHQ96KK5 128 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MTERF1Q99551 399 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PKP4Q99569 1192 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HIST1H2AJQ99878 128 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HAUS8Q9BT25 410 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 H2AFJQ9BTM1 129 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ACAT2Q9BWD1 397 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SLC12A9Q9BXP2 914 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MRPL1Q9BYD6 325 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 OSGEPL1Q9H4B0 414 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 C2orf42Q9NWW7 574 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 NDRG2Q9UN36 371 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 POMPQ9Y244 141 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LRCH1Q9Y2L9 728 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 TDRKHQ9Y2W6 561 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PCDHGA7Q9Y5G6 932 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 GPR45Q9Y5Y3 372 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 AK5Q9Y6K8 562 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 DENND4AQ7Z401 1863 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 HEATR5BQ9P2D3 2071 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3DA0A087WVF3 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3IA0A087WXS9 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3EA0A087X179 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3KA0A087X1G2 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 A0A1W2PQF6 199 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 A0A1W2PQU0 124 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 SLC5A10A0PJK1 596 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3FA6NER0 549 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3LB9A6J9 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 FAM47E-STBD1D6RA91 191 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 GFYI3L273 518 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 MANBAO00462 879 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 SOX1O00570 391 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-202ENST00000359366 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-202ENST00000359366 KCNJ13O60928 360 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 SLCO2B1O94956 709 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 CHEK2O96017 543 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TBC1D3HP0C7X1 549 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 IL32P24001 234 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 MAP4P27816 1152 aaKnown RBP4.93□□□□□ -1.62
ATXN3-202ENST00000359366 ZFP36L2P47974 494 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms