RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 AMD1P17707 334 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PCMT1P22061 227 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PRPH2P23942 346 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 FMO3P31513 532 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 RYKP34925 604 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 ARHGDIAP52565 204 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PTSQ03393 145 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 MPPE1Q53F39 396 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 ZC3H12BQ5HYM0 836 aaKnown RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 OR2T5Q6IEZ7 315 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 C22orf39Q6P5X5 142 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 SERPINA13PQ6UXR4 307 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CEP68Q76N32 757 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CYP4Z1Q86W10 505 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 SYT12Q8IV01 421 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 L3MBTL4Q8NA19 623 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 SETD9Q8NE22 299 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 OR2T29Q8NH02 315 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 MCOLN3Q8TDD5 553 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CSGALNACT1Q8TDX6 532 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 ASB11Q8WXH4 323 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 FKBP10Q96AY3 582 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 COX4I2Q96KJ9 171 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 ATG10Q9H0Y0 220 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PALMDQ9NP74 551 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 AASDHPPTQ9NRN7 309 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 MRPL17Q9NRX2 175 aaKnown RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 DNAJC11Q9NVH1 559 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 FBXO10Q9UK96 956 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 NAALAD2Q9Y3Q0 740 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 IGLV3-16A0A075B6K0 115 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 ZNF99A8MXY4 864 aaPredicted RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 CLIC1O00299 241 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 NUAK1O60285 661 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PRAMEF4O60810 478 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 NDUFS2O75306 463 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 EPN2O95208 641 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 UGT2B4P06133 528 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 C1SP09871 688 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CYP2A7P20853 494 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PTPN5P54829 565 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 CHIT1Q13231 466 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 RAB33AQ14088 237 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 PRAMEF9Q5VWM5 478 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 DCDC5Q6ZRR9 648 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 SERPINA11Q86U17 422 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 HORMAD1Q86X24 394 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 OR7A2PQ8NGA2 310 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 TRUB1Q8WWH5 349 aaKnown RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 MRPS31Q92665 395 aaKnown RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 ZNF641Q96N77 438 aaPredicted RBP8.34□□□□□ -1.07
RFX3-202ENST00000358730 P2RY13Q9BPV8 354 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 BBS2Q9BXC9 721 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 GABARAPL1Q9H0R8 117 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 IL1RAPQ9NPH3 570 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 KIF17Q9P2E2 1029 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 KIAA1671Q9BY89 1806 aa8.34□□□□□ -1.07
RFX3-202ENST00000358730 UPK3BL1B0FP48 263 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 UPK3BL2E5RIL1 263 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 AOC2O75106 756 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 COX7A2P14406 83 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 ENGP17813 658 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 PRPS1L1P21108 318 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 EMX1Q04741 257 aaPredicted RBP8.34□□□□□ -1.08
RFX3-202ENST00000358730 SP140Q13342 867 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 DDX39BQ13838 428 aaKnown RBP8.34□□□□□ -1.08
RFX3-202ENST00000358730 GBX1Q14549 363 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 DUOXA1Q1HG43 343 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 ZNF621Q6ZSS3 439 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 MSANTD1Q6ZTZ1 278 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 VTCN1Q7Z7D3 282 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 B3GNT8Q7Z7M8 397 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 CMTM8Q8IZV2 173 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 CENPSQ8N2Z9 138 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 ABHD11Q8NFV4 315 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 FIBINQ8TAL6 211 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 PXYLP1Q8TE99 480 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 ZNF566Q969W8 418 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 VOPP1Q96AW1 172 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 ECHDC3Q96DC8 303 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 MCCC1Q96RQ3 725 aaPredicted RBP8.34□□□□□ -1.08
RFX3-202ENST00000358730 DPH2Q9BQC3 489 aaPredicted RBP8.34□□□□□ -1.08
RFX3-202ENST00000358730 TM9SF3Q9HD45 589 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 PRM3Q9NNZ6 103 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 B4GALT6Q9UBX8 382 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 AASSQ9UDR5 926 aa8.34□□□□□ -1.08
RFX3-202ENST00000358730 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
RFX3-202ENST00000358730 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 MAGEB17A8MXT2 336 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 BOLA2-SMG1P6H3BVE0 249 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 AXIN1O15169 862 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 UGT2B11O75310 529 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 DNAJB5O75953 348 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 FKBP9O95302 570 aa8.33□□□□□ -1.08
RFX3-202ENST00000358730 FABP3P05413 133 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms