RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ANGPTL6Q8NI99 470 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SCRN2Q96FV2 425 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ACTR6Q9GZN1 396 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM134Q9H6X4 195 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RANGRFQ9HD47 186 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NR2E3Q9Y5X4 410 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RASGRP1O95267 797 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 RHOCP08134 193 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ITPKAP23677 461 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SCARB2Q14108 478 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GPR68Q15743 365 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PUS10Q3MIT2 529 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CDHR3Q6ZTQ4 885 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 STYXQ8WUJ0 223 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PIWIL1Q96J94 861 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 POLR1EQ9GZS1 481 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CST11Q9H112 138 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 FLRT1Q9NZU1 646 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MAGEB17A8MXT2 336 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ACKR2O00590 384 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 KRT33AO76009 404 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 F7P08709 466 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PRPS2P11908 318 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 IVDP26440 423 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CA5AP35218 305 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GRIA1P42261 906 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CAPZA1P52907 286 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SAMD12Q8N8I0 201 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NIPA2Q8N8Q9 360 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM159Q96B96 161 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PYURFQ96I23 114 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 C7orf50Q9BRJ6 194 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM185BQ9H7F4 350 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 IFT46Q9NQC8 304 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PLEKHA6Q9Y2H5 1048 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NOX1Q9Y5S8 564 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 BUD31P41223 144 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ALDH3B2P48448 385 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CPSF6Q16630 551 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PAQR7Q86WK9 346 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DAW1Q8N136 415 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ELMOD3Q96FG2 381 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MYRFLQ96LU7 910 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 C2CD4BA6NLJ0 364 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MSI1O43347 362 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MRPS14O60783 128 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PRAMEF2O60811 474 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 STK16O75716 305 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 FAM214AQ32MH5 1076 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 BEND5Q7L4P6 421 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CAND1Q86VP6 1230 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 BPHLQ86WA6 291 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ATP6V1C2Q8NEY4 427 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 OR7G2Q8NG99 324 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 OR6C4Q8NGE1 309 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TCTEX1D2Q8WW35 142 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 KAT2AQ92830 837 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GPR83Q9NYM4 423 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ERVK-19Q9WJR5 959 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TCRBV3S1A0A5B6 114 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ANKDD1BA6NHY2 528 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 A8MUA0 341 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GRID2O43424 1007 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NOS2P35228 1153 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 LHX1P48742 406 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SIX1Q15475 284 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 WSCD1Q658N2 575 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 YIPF7Q8N8F6 280 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL5Q96PQ7 755 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 RAD18Q9NS91 495 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 TXNL1O43396 289 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MATKP42679 507 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ETV4P43268 484 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DGKQP52824 942 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DSTNP60981 165 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 XKR6Q5GH73 641 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PRSS48Q7RTY5 328 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DCUN1D3Q8IWE4 304 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 HSPA12BQ96MM6 686 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MCCC1Q96RQ3 725 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PIP5K1AQ99755 562 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 INTS6Q9UL03 887 aaKnown RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 MITFO75030 526 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PPM1BO75688 479 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DNAJB13P59910 316 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NXPE2Q96DL1 559 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 FER1L6Q2WGJ9 1857 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 NFIXQ14938 502 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 PGM5Q15124 567 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 DUOXA1Q1HG43 343 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 HSDL1Q3SXM5 330 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 SETMARQ53H47 684 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF311Q5JNZ3 666 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 CNIH2Q6PI25 160 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 WDSUB1Q8N9V3 476 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
VPS13B-203ENST00000358544 ARL11Q969Q4 196 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms