RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 DDX4Q9NQI0 724 aaKnown RBP12.57□□□□□ -0.4
SMC4-202ENST00000357388 PTPRJQ12913 1337 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 PLSCR1O15162 318 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 OR4F21O95013 312 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 NR2C1P13056 603 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 POU2F1P14859 743 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 PTPN2P17706 415 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 PRPS1L1P21108 318 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 AVPR1BP47901 424 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 DSC3Q14574 896 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 DUSP28Q4G0W2 176 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 ALG1LQ6GMV1 187 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 PLD5Q8N7P1 536 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 MAF1Q9H063 256 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 SLIT1O75093 1534 aa12.57□□□□□ -0.4
SMC4-202ENST00000357388 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 GABRDO14764 452 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 PIAS1O75925 651 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 MATN1P21941 496 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 GLP1RP43220 463 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 DUSP4Q13115 394 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 SEMA3AQ14563 771 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 FAM174BQ3ZCQ3 159 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 MINDY4Q4G0A6 757 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 TSTD2Q5T7W7 516 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 TMEM139Q8IV31 216 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 PIAS4Q8N2W9 510 aaPredicted RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 OR4K2Q8NGD2 314 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 COQ8AQ8NI60 647 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 SLC38A3Q99624 504 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 TCEAL7Q9BRU2 100 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 VNN2O95498 520 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 RHOQP17081 205 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 AOC1P19801 751 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 ADRA1BP35368 520 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 EML3Q32P44 896 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 LRRC57Q8N9N7 239 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 RBM18Q96H35 190 aaKnown RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 PBDC1Q9BVG4 233 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 AGAP5A6NIR3 686 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 PAGE1O75459 146 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 RFPL1O75677 317 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 SCGB1D2O95969 90 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 DSG2Q14126 1118 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 COL28A1Q2UY09 1125 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 CPXM1Q96SM3 734 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 WACQ9BTA9 647 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 KCNN3Q9UGI6 736 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 GRID2O43424 1007 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 ATP5A1P25705 553 aaKnown RBP12.56□□□□□ -0.4
SMC4-202ENST00000357388 PTGER3P43115 390 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 GAD2Q05329 585 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 TAF10Q12962 218 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 CHIT1Q13231 466 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 LCLAT1Q6UWP7 414 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 XYLT1Q86Y38 959 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 ISOC1Q96CN7 298 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 GIMAP5Q96F15 307 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 ALKBH4Q9NXW9 302 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
SMC4-202ENST00000357388 AURKAO14965 403 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SSX4O60224 188 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 OR2B3O76000 313 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 TAL1P17542 331 aaPredicted RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 HSPA7P48741 367 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 RHDQ02161 417 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 MEDAGQ5VYS4 303 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SCRN2Q96FV2 425 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SLA2Q9H6Q3 261 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 DUS2Q9NX74 493 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 M0R129 80 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 C1RP00736 705 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 VAMP1P23763 118 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 IL12BP29460 328 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 CORO1AP31146 461 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 GRIA2P42262 883 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SDHAF4Q5VUM1 108 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 KIAA0930Q6ICG6 404 aaPredicted RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ZNF709Q8N972 641 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 MFSD8Q8NHS3 518 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 POC1BQ8TC44 478 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms