RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 B4E171 279 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 UBXN8O00124 270 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TK2O00142 265 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TOP3BO95985 862 aaKnown RBP15.4■□□□□ 0.06
FDPS-201ENST00000356657 NCF1P14598 390 aaPredicted RBP15.4■□□□□ 0.06
FDPS-201ENST00000356657 TSPAN7P41732 249 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 RAB15P59190 212 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 PPP1CAP62136 330 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TARDBPQ13148 414 aaKnown RBP eCLIP15.4■□□□□ 0.06
FDPS-201ENST00000356657 KIF26BQ2KJY2 2108 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 IGF2-ASQ6U949 168 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 SUSD1Q6UWL2 747 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 RAB11FIP2Q7L804 512 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TAX1BP1Q86VP1 789 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 SPNS2Q8IVW8 549 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 LSMEM2Q8N112 164 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 C4orf33Q8N1A6 199 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TRAPPC9Q96Q05 1148 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 SCNM1Q9BWG6 230 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 CD244Q9BZW8 370 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 CENPHQ9H3R5 247 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 FANCEQ9HB96 536 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TMEM216Q9P0N5 145 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 SNX7Q9UNH6 387 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 CEP295Q9C0D2 2601 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 IGHV5-51A0A0C4DH38 117 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 PLD2O14939 933 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 GNAZP19086 355 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 GMPRP36959 345 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 KCNC1P48547 511 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 ACY1Q03154 408 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 TSTA3Q13630 321 aaPredicted RBP15.4■□□□□ 0.06
FDPS-201ENST00000356657 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.063e-7■□□□□ 9.2
FDPS-201ENST00000356657 SNAP47Q5SQN1 464 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 THOC6Q86W42 341 aaKnown RBP15.4■□□□□ 0.06
FDPS-201ENST00000356657 PPFIBP2Q8ND30 876 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 EXT2Q93063 718 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 ZPBPQ9BS86 351 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 PITHD1Q9GZP4 211 aaPredicted RBP15.4■□□□□ 0.06
FDPS-201ENST00000356657 EHD1Q9H4M9 534 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 ZNF358Q9NW07 568 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 SOHLH2Q9NX45 425 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 OPTCQ9UBM4 332 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 PLLPQ9Y342 182 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 DYRK1BQ9Y463 629 aa15.4■□□□□ 0.06
FDPS-201ENST00000356657 NCOR2Q9Y618 2525 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 SLC9B1P1A6NJY1 282 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 K7EPI3 171 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 CASC3O15234 703 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 TM9SF1O15321 606 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 KIF1CO43896 1103 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 PLIN3O60664 434 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 KATNA1O75449 491 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 WDR47O94967 919 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 EZRP15311 586 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 ST6GAL1P15907 406 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 NPPBP16860 134 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 MAGP20916 626 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 ATP5F1P24539 256 aaPredicted RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 SHC2P98077 582 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 PCDH1Q08174 1060 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 CDC16Q13042 620 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 IL11RAQ14626 422 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 C16orf72Q14CZ0 275 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 PDK4Q16654 411 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 PFKFB4Q16877 469 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 ZC3H12BQ5HYM0 836 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 AGBL2Q5U5Z8 902 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 TMEM151AQ8N4L1 468 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 C2orf73Q8N5S3 287 aaPredicted RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 TBC1D19Q8N5T2 526 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 RCBTB1Q8NDN9 531 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 ABHD11Q8NFV4 315 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 TEFMQ96QE5 360 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 NRTNQ99748 197 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 TMEM79Q9BSE2 394 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 C1QTNF3Q9BXJ4 246 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 POLR1BQ9H9Y6 1135 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 TMBIM4Q9HC24 238 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 FBXO8Q9NRD0 319 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 TMEM184CQ9NVA4 438 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 DNAJC11Q9NVH1 559 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 SIDT1Q9NXL6 827 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 CPSF2Q9P2I0 782 aaKnown RBP15.39■□□□□ 0.05
FDPS-201ENST00000356657 WASF3Q9UPY6 502 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 LOXL2Q9Y4K0 774 aa15.39■□□□□ 0.05
FDPS-201ENST00000356657 OR2A25A4D2G3 310 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 TAPBPO15533 448 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 PROCP04070 461 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 JMJD7P0C870 316 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 MPSTP25325 297 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 PSMB5P28074 263 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 GRK3P35626 688 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 GRIA3P42263 894 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 LSSP48449 732 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 ASPHQ12797 758 aa15.38■□□□□ 0.05
FDPS-201ENST00000356657 ZXDCQ2QGD7 858 aaPredicted RBP15.38■□□□□ 0.05
FDPS-201ENST00000356657 TMEM164Q5U3C3 297 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms