RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ZNF41P51814 821 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 DCDC1P59894 354 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC10A7Q0GE19 358 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 FSTL1Q12841 308 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 DUOXA1Q1HG43 343 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 C10orf62Q5T681 223 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 ZNF776Q68DI1 518 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 OTOP2Q7RTS6 562 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 GPAT4Q86UL3 456 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 FAM86B1Q8N7N1 296 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MTMR14Q8NCE2 650 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SPATA22Q8NHS9 363 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SMPDL3AQ92484 453 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ZNF471Q9BX82 626 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 TMEM121BQ9BXQ6 578 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 POLR2J2Q9GZM3 115 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 DPEP3Q9H4B8 488 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TNFRSF10DQ9UBN6 386 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 EIF3KQ9UBQ5 218 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 Q9Y3F1 56 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SH3PXD2BA1X283 911 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SMCO3A2RU48 225 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 HTR3EA5X5Y0 456 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC33A1O00400 549 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 PMM2O15305 246 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 H1F0P07305 194 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SMPD1P17405 629 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GDI2P50395 445 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SELENOVP59797 346 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CSTF1Q05048 431 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ST3GAL3Q11203 375 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TUBB3Q13509 450 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARSJQ5FYB0 599 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 CNKSR3Q6P9H4 555 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ANKRD46Q86W74 232 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TIGD4Q8IY51 512 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 BANPQ8N9N5 519 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 OR52E4Q8NGH9 312 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TCEAL3Q969E4 200 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC25A36Q96CQ1 311 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GATA5Q9BWX5 397 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 DENND2DQ9H6A0 471 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 METTL8Q9H825 291 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ZCCHC3Q9NUD5 404 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 MTMR10Q9NXD2 777 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 KLRF1Q9NZS2 232 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ABCD2Q9UBJ2 740 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 DKKL1Q9UK85 242 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NEURL4Q96JN8 1562 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ACOX3O15254 700 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 HK1P19367 917 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 S100A2P29034 98 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GALK1P51570 392 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARF3P61204 181 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARF1P84077 181 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 OC90Q02509 493 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 MXD1Q05195 221 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MRPL49Q13405 166 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 DAG1Q14118 895 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MAD2L1BPQ15013 274 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SWT1Q5T5J6 900 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 LDB1Q86U70 411 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 TOMM5Q8N4H5 51 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 YIPF7Q8N8F6 280 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 C4orf32Q8N8J7 132 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 THAP6Q8TBB0 222 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SH3RF2Q8TEC5 729 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NINJ1Q92982 152 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 DPAGT1Q9H3H5 408 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 C11orf49Q9H6J7 331 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PTGES2Q9H7Z7 377 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ADAP2Q9NPF8 381 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 FZD4Q9ULV1 537 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TTLL8A6PVC2 850 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NDUFS4O43181 175 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 OAS1P00973 400 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 PDYNP01213 254 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PFKMP08237 780 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GP1BBP13224 206 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ATP1B2P14415 290 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ETS2P15036 469 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARL3P36405 182 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ASPAP45381 313 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ADAM15Q13444 863 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GPM6BQ13491 265 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SYT16Q17RD7 645 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TNFAIP8L2Q6P589 184 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 TUBA3EQ6PEY2 450 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 IQCHQ86VS3 1027 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 IQCKQ8N0W5 287 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TMEM125Q96AQ2 219 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 UCK2Q9BZX2 261 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ELAC1Q9H777 363 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SNTG1Q9NSN8 517 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SEC14L4Q9UDX3 406 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms