RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 FCER2P06734 321 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 FAM157BP0CG42 384 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 GPC1P35052 558 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CASP2P42575 452 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 RPA4Q13156 261 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 TIMM50Q3ZCQ8 353 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 SHQ1Q6PI26 577 aaKnown RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 FAM131AQ6UXB0 335 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CTU1Q7Z7A3 348 aaKnown RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 LRRTM3Q86VH5 581 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CCDC71Q8IV32 467 aaPredicted RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 TTC29Q8NA56 475 aaPredicted RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 OR5T2Q8NGG2 359 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 MYDGFQ969H8 173 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 UBE2FQ969M7 185 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 PHF21BQ96EK2 531 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 SENP8Q96LD8 212 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 RTP3Q9BQQ7 232 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CLEC4MQ9H2X3 399 aaPredicted RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 GALNT9Q9HCQ5 603 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 CASS4Q9NQ75 786 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 COMMD10Q9Y6G5 202 aa15.33■□□□□ 0.04
RTN3-205ENST00000356000 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.04
RTN3-205ENST00000356000 FAM95CA0A1B0GW59 222 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 A0A1W2PPL8 197 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 PQLC2LA1A4F0 135 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 MFSD2BA6NFX1 497 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 LRRC72A6NJI9 287 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 ASB14A6NK59 587 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 PCDHGA12O60330 932 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 FHP07954 510 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 TSPAN8P19075 237 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 POU1F1P28069 291 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 SREBF2Q12772 1141 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 PICALMQ13492 652 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 UGCGQ16739 394 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 NCBP2-AS2Q69YL0 99 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 FCRLBQ6BAA4 426 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 ZSWIM9Q86XI8 627 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 MARVELD1Q9BSK0 173 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 KATNAL1Q9BW62 490 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 RBFOX1Q9NWB1 397 aaKnown RBP15.32■□□□□ 0.04
RTN3-205ENST00000356000 SDHAF2Q9NX18 166 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 KIF25Q9UIL4 384 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 CMAHPQ9Y471 501 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 INPPL1O15357 1258 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 NDUFS6O75380 124 aaKnown RBP15.32■□□□□ 0.04
RTN3-205ENST00000356000 MPC2O95563 127 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 ECDO95905 644 aaPredicted RBP15.32■□□□□ 0.04
RTN3-205ENST00000356000 EPOP01588 193 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 SLC19A1P41440 591 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 DAPP51397 102 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 DIO3P55073 304 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 ETFDHQ16134 617 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 CYP27C1Q4G0S4 372 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 PDSS1Q5T2R2 415 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 CERCAMQ5T4B2 595 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 TRMT1LQ7Z2T5 733 aaKnown RBP15.32■□□□□ 0.04
RTN3-205ENST00000356000 GLCCI1Q86VQ1 547 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 SLC37A3Q8NCC5 494 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 TWIST2Q8WVJ9 160 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 P2RY11Q96G91 374 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 PTTG3PQ9NZH4 202 aa15.32■□□□□ 0.04
RTN3-205ENST00000356000 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 FAM170BA6NMN3 283 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 GPX5O75715 221 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ITGB1P05556 798 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 FGF4P08620 206 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 CLCN7P51798 805 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 IFRD2Q12894 506 aaPredicted RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 DGKZQ13574 1117 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ZZZ3Q8IYH5 903 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 SRFBP1Q8NEF9 429 aaKnown RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 UPRTQ96BW1 309 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 C1QTNF6Q9BXI9 259 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 TTYH1Q9H313 450 aaPredicted RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 ESRP2Q9H6T0 727 aaKnown RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 PLCXD1Q9NUJ7 323 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 SPATA6Q9NWH7 488 aaPredicted RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 SESN1Q9Y6P5 492 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 DPYSL4O14531 572 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 GATCO43716 136 aaKnown RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 NMBRP28336 390 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ZNF157P51786 506 aaPredicted RBP15.31■□□□□ 0.04
RTN3-205ENST00000356000 SOX10P56693 466 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 TAS2R39P59534 338 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 CREMQ03060 361 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 TSC22D1Q15714 1073 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 DPYSL2Q16555 572 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 WSCD2Q2TBF2 565 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 LCN1P1Q5VSP4 162 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 RTL4Q6ZR62 310 aa15.31■□□□□ 0.04
RTN3-205ENST00000356000 ZNF567Q8N184 647 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms