RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PDPRQ8NCN5 879 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 PMEPA1Q969W9 287 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 DPH7Q9BTV6 452 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 MRPS30Q9NP92 439 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 CUEDC1Q9NWM3 386 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 NUDT4Q9NZJ9 180 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 PTBP2Q9UKA9 531 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC22A14Q9Y267 594 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 FRYQ5TBA9 3013 aa17.21■□□□□ 0.35
PDLIM7-202ENST00000355841 SNRNP200O75643 2136 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 LRRC14BA6NHZ5 514 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 SYCE1LA8MT33 242 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 MAP2K7O14733 419 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 HCRTR1O43613 425 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 RBP1P09455 135 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 JMJD7P0C870 316 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 GFAPP14136 432 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 NPPBP16860 134 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 CMPK1P30085 196 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 MAPK10P53779 464 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 GABREP78334 506 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 PRDX1Q06830 199 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 FOXM1Q08050 763 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 SULT1C3Q6IMI6 304 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 THOC6Q86W42 341 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 WDR36Q8NI36 951 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 GRAMD1AQ96CP6 724 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 CTRCQ99895 268 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 MRPL57Q9BQC6 102 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 MRPL46Q9H2W6 279 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 APMAPQ9HDC9 416 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 AKAP7Q9P0M2 348 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 EMCNQ9ULC0 261 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 TRABD2BA6NFA1 517 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 SPAG7O75391 227 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 WDR47O94967 919 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 SLC6A12P48065 614 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 GPR19Q15760 415 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 DEFB110Q30KQ9 67 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 FIGLAQ6QHK4 219 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 D2HGDHQ8N465 521 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 BMPERQ8N8U9 685 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 PHF21BQ96EK2 531 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 PRR11Q96HE9 360 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 SIDT1Q9NXL6 827 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 DCDC2Q9UHG0 476 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 NEUROG3Q9Y4Z2 214 aa17.2■□□□□ 0.34
PDLIM7-202ENST00000355841 CEP295Q9C0D2 2601 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 H7BY64 318 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 COPEO14579 308 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 SLC18A2Q05940 514 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 ADCK2Q7Z695 626 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 CARFQ8N187 725 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 PRAP1Q96NZ9 151 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 FCRL4Q96PJ5 515 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 OR6C1Q96RD1 312 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 POLR1BQ9H9Y6 1135 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 PDE7BQ9NP56 450 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 BTRCQ9Y297 605 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 MSRB2Q9Y3D2 182 aa17.19■□□□□ 0.34
PDLIM7-202ENST00000355841 TARM1B6A8C7 271 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CCNT2O60583 730 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 GLRA3O75311 464 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 TNFSF15O95150 251 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 SIX3O95343 332 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CTSBP07858 339 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 GSTA1P08263 222 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CDH1P12830 882 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CCND1P24385 295 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CRHR1P34998 444 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 GGT5P36269 586 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CCT5P48643 541 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 EIF3IQ13347 325 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 CDKL4Q5MAI5 379 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 LCTLQ6UWM7 567 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 KMT5CQ86Y97 462 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 PLD3Q8IV08 490 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 TCAIMQ8N3R3 496 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 PTGR2Q8N8N7 351 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 BANPQ8N9N5 519 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 NEIL2Q969S2 332 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 TCTN2Q96GX1 697 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 ACSS2Q9NR19 701 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 SLC39A1Q9NY26 324 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 ANGPTL2Q9UKU9 493 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 AK5Q9Y6K8 562 aa17.18■□□□□ 0.34
PDLIM7-202ENST00000355841 AGPSO00116 658 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 CTSVO60911 334 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 STK16O75716 305 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 CCNDBP1O95273 360 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 TUBB3Q13509 450 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 CATSPEREQ5SY80 951 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 LCA5Q86VQ0 697 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 C17orf64Q86WR6 236 aa17.17■□□□□ 0.34
PDLIM7-202ENST00000355841 SNX31Q8N9S9 440 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms