RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 S1PR4O95977 384 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 AGXTP21549 392 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ZDHHC21Q8IVQ6 265 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MOSPD2Q8NHP6 518 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 FAM81AQ8TBF8 368 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF778Q96MU6 729 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 DGAT2Q96PD7 388 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 HERPUD2Q9BSE4 406 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 XKRYO14609 159 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ZBTB11O95625 1053 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 SRCP12931 536 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 C1orf61Q13536 156 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CEP78Q5JTW2 689 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 RSBN1Q5VWQ0 802 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 TSPAN33Q86UF1 283 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 OR7A2PQ8NGA2 310 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 OR10H5Q8NGA6 315 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 DNAJB8Q8NHS0 232 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MTG2Q9H4K7 406 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 NECTIN3Q9NQS3 549 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 IFT80Q9P2H3 777 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 STON1Q9Y6Q2 735 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 RFPL1O75677 317 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ALPPP05187 535 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 JUNP05412 331 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ARSAP15289 507 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 PGGT1BP53609 377 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 SCARB2Q14108 478 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ELOCQ15369 112 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 TMEM164Q5U3C3 297 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MCEMP1Q8IX19 187 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 SNRNP27Q8WVK2 155 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 GTPBP3Q969Y2 492 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CDADC1Q9BWV3 514 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MRPS26Q9BYN8 205 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MCOLN1Q9GZU1 580 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CLK4Q9HAZ1 481 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ALOX12P18054 663 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ARSDP51689 593 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 UFM1P61960 85 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 PCBP2Q15366 365 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MLIPQ5VWP3 458 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 NEK5Q6P3R8 708 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CBR4Q8N4T8 237 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 KAT2AQ92830 837 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 LRRC3Q9BY71 257 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 HRASLS2Q9NWW9 162 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 TAS2R1Q9NYW7 299 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 AK5Q9Y6K8 562 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 C9J4A7 227 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 H7BY64 318 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 BCKDKO14874 412 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 MTHFD1P11586 935 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CDK9P50750 372 aaKnown RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 SIX1Q15475 284 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 FAM91A1Q658Y4 838 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 SLC34A3Q8N130 599 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 PIGXQ8TBF5 258 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 JPH3Q8WXH2 748 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-201ENST00000353479 PRAP1Q96NZ9 151 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 PCDHAC1Q9H158 963 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 HCN3Q9P1Z3 774 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ABI3Q9P2A4 366 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 CD207Q9UJ71 328 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 FZD4Q9ULV1 537 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 POMPQ9Y244 141 aa14.5□□□□□ -0.09
COL17A1-201ENST00000353479 ENGP17813 658 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 XIAPP98170 497 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ALKAL1Q6UXT8 129 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 FRMD7Q6ZUT3 714 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 GIMAP2Q9UG22 337 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CENPXA8MT69 81 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CLIC1O00299 241 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 KLF11O14901 512 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CCNB2O95067 398 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ALOX5P09917 674 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 NR2F6P10588 404 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 G6PDP11413 515 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 TAS2R50P59544 299 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 BNC1Q01954 994 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF852Q6ZMS4 543 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ADGRG6Q86SQ4 1221 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 GJD3Q8N144 294 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CENPNQ96H22 339 aaPredicted RBP14.49□□□□□ -0.09
COL17A1-201ENST00000353479 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CXCL16Q9H2A7 254 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ZSCAN32Q9NX65 697 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 STMN3Q9NZ72 180 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ZIM2Q9NZV7 527 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 AKAP11Q9UKA4 1901 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 E7ESA3 106 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 B4GALT2O60909 372 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 NME6O75414 186 aaPredicted RBP14.49□□□□□ -0.09
COL17A1-201ENST00000353479 THRBP10828 461 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CD1DP15813 335 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 CCKBRP32239 447 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 ZNF542PQ5EBM4 170 aa14.49□□□□□ -0.09
COL17A1-201ENST00000353479 SLC2A7Q6PXP3 512 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms