RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CHRAC1Q9NRG0 131 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 ZNF490Q9ULM2 529 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 ERVW-1Q9UQF0 538 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 CRYL1Q9Y2S2 319 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
SKP1-202ENST00000353411 SPIN1Q9Y657 262 aaPredicted RBP4.93□□□□□ -1.62
SKP1-202ENST00000353411 CEP250Q9BV73 2442 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 COL14A1Q05707 1796 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 RRN3P2A6NIE6 340 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRH1P02810 166 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 HOXC6P09630 235 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 FGFR1P11362 822 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZP3P21754 424 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GPR15P49685 360 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SEC13P55735 322 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 HMGN3Q15651 99 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PTPRNQ16849 979 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 UGT8Q16880 541 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 HSDL1Q3SXM5 330 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 KRBOX4Q5JUW0 171 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 METTL11BQ5VVY1 283 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRAMEF13Q5VWM6 474 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RETSATQ6NUM9 610 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 LINGO2Q7L985 606 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SYT12Q8IV01 421 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRR11Q96HE9 360 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 SAMD11Q96NU1 681 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RIOK2Q9BVS4 552 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 BTBD2Q9BX70 525 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SLC38A1Q9H2H9 487 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ARNT2Q9HBZ2 717 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TMEM39AQ9NV64 488 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 C1orf109Q9NX04 203 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MGAT4CQ9UBM8 478 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 ERVK-19Q9WJR5 959 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 BTRCQ9Y297 605 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 LOXHD1Q8IVV2 1947 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CNTNAP4Q9C0A0 1308 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PIM1P11309 404 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 ADORA2AP29274 412 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 DSG3P32926 999 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ARCN1P48444 511 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 PTGES3Q15185 160 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 TEX44Q53QW1 395 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RPL13AP3Q6NVV1 102 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ULK3Q6PHR2 472 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 BLOC1S3Q6QNY0 202 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NPNTQ6UXI9 565 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SMIM15Q7Z3B0 74 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NIPA2Q8N8Q9 360 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 REPS1Q96D71 796 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PYURFQ96I23 114 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 WDCPQ9H6R7 721 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SDHAF2Q9NX18 166 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 DTLQ9NZJ0 730 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 KIF25Q9UIL4 384 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GPSM3Q9Y4H4 160 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CACNA1DQ01668 2161 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 EFCAB7A8K855 629 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 E7ESA3 106 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RTCAO00442 366 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 KCNQ2O43526 872 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MT-ND2P03891 347 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CTNNB1P35222 781 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CPOXP36551 454 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 AIF1P55008 147 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RPL38P63173 70 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 BCL2L15Q5TBC7 163 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 METAP1DQ6UB28 335 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 RHOUQ7L0Q8 258 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 STK40Q8N2I9 435 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZBTB44Q8NCP5 570 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 OR6C4Q8NGE1 309 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 OR4D10Q8NGI6 311 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 LPAR1Q92633 364 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 OR51J1Q9H342 316 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 KLQ9UEF7 1012 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZNF225Q9UK10 706 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GABARAPO95166 117 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 RNF4P78317 190 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GK3PQ14409 553 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NTRK2Q16620 822 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 GPR158Q5T848 1215 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 PRAMEF17Q5VTA0 474 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 CXorf57Q6NSI4 855 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 SWSAP1Q6NVH7 229 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZCCHC12Q6PEW1 402 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 LYARQ9NX58 379 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 HOXC10Q9NYD6 342 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 NOCTQ9UK39 431 aaKnown RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 VSTM5A8MXK1 200 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 M0QYT0 321 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 SHOXO15266 292 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 TOXO94900 526 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 HTR3BO95264 441 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZNF35P13682 527 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 ZNF26P17031 533 aaPredicted RBP4.92□□□□□ -1.62
SKP1-202ENST00000353411 ETV6P41212 452 aa4.92□□□□□ -1.62
SKP1-202ENST00000353411 MEOX2P50222 304 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms