RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TSPAN19P0C672 248 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 ARSBP15848 533 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 HTR7P34969 479 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SULT1E1P49888 294 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 ERVK-8P63133 956 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 RPA4Q13156 261 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
IFT88-202ENST00000351808 WSCD2Q2TBF2 565 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 KLHL12Q53G59 568 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 CLLU1Q5K131 121 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 C6orf136Q5SQH8 315 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 GCNT7Q6ZNI0 430 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SNX20Q7Z614 316 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 NPWQ8N729 165 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 DCBLD1Q8N8Z6 715 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 OR6C4Q8NGE1 309 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 OR8K3Q8NH51 312 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PTP4A1Q93096 173 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PHF21AQ96BD5 680 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 TNIP3Q96KP6 325 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 C1orf74Q96LT6 269 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 USP21Q9UK80 565 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 CMAHPQ9Y471 501 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 TNPO3Q9Y5L0 923 aaKnown RBP12.9□□□□□ -0.34
IFT88-202ENST00000351808 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 MGAMO43451 1857 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 RPL35P42766 123 aaKnown RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 AKR1D1P51857 326 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 CSNK2BP67870 215 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 NFKB2Q00653 900 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 MXD1Q05195 221 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 ST3GAL4Q11206 333 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 CDH18Q13634 790 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 OR6M1Q8NGM8 313 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 UPRTQ96BW1 309 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 TSPAN17Q96FV3 270 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 PYURFQ96I23 114 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 GABARAPL1Q9H0R8 117 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 CD274Q9NZQ7 290 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 CYB5R1Q9UHQ9 305 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 IKZF3Q9UKT9 509 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 FZD6O60353 706 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 AOC2O75106 756 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 MTHFD2P13995 350 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 CHRNA4P43681 627 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 OLR1P78380 273 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 DOC2BQ14184 412 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 OR4D1Q15615 310 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 C10orf62Q5T681 223 aaPredicted RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 FAM171A1Q5VUB5 890 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 UFD1Q92890 307 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 MGLLQ99685 303 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
IFT88-202ENST00000351808 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
IFT88-202ENST00000351808 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 PLOD3O60568 738 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 TPOP07202 933 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 G6PDP11413 515 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 RORCP51449 518 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 RUNX1T1Q06455 604 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 ABHD15Q6UXT9 468 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 NIM1KQ8IY84 436 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 WDFY2Q96P53 400 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 HBEGFQ99075 208 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 C12orf57Q99622 126 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 TBL1YQ9BQ87 522 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 GLIS2Q9BZE0 524 aaPredicted RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 ACTL8Q9H568 366 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 DOCK5Q9H7D0 1870 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 SLC35F4A4IF30 521 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 WWP2O00308 870 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 ARNTLO00327 626 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms