RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SPANXN4Q5MJ08 99 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LRIF1Q5T3J3 769 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 C10orf62Q5T681 223 aaPredicted RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 METRNLQ641Q3 311 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LPCAT4Q643R3 524 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 ANO7Q6IWH7 933 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CAPN13Q6MZZ7 669 aaPredicted RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 KIAA1161Q6NSJ0 714 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CRTC3Q6UUV7 619 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 IZUMO2Q6UXV1 221 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MSANTD1Q6ZTZ1 278 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LRRTM4Q86VH4 590 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 AMZ2Q86W34 360 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SPATA24Q86W54 205 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 RALGPS2Q86X27 583 aaPredicted RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DHFR2Q86XF0 187 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MSRB3Q8IXL7 192 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LAS2Q8IYD9 372 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 IL17RCQ8NAC3 791 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PAPD5Q8NDF8 572 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 OR2T34Q8NGX1 318 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DNAJB8Q8NHS0 232 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CSGALNACT1Q8TDX6 532 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SETD7Q8WTS6 366 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 NUDT8Q8WV74 236 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 GTF2H4Q92759 462 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MTFMTQ96DP5 389 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 APIPQ96GX9 242 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CDX2Q99626 313 aaPredicted RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CGREF1Q99674 301 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PKP2Q99959 881 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DPY30Q9C005 99 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 TRIM15Q9C019 465 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 KLHL4Q9C0H6 718 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MKRN2Q9H000 416 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 VCX3BQ9H321 246 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 BRF2Q9HAW0 419 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MBNL1Q9NR56 388 aaKnown RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CCM2LQ9NUG4 571 aaPredicted RBP6.7□□□□□ -1.34
TRIM55-203ENST00000350034 ARMC1Q9NVT9 282 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 CLDND1Q9NY35 253 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 FAM8A1Q9UBU6 413 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SLC23A2Q9UGH3 650 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PCDHB3Q9Y5E6 796 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 PCDHGA11Q9Y5H2 935 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 MTCH2Q9Y6C9 303 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 KCNE2Q9Y6J6 123 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
TRIM55-203ENST00000350034 SHISA7A6NL88 538 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FOXE1O00358 373 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 ARPC2O15144 300 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 KMOO15229 486 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 DFNA5O60443 496 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 KCNJ13O60928 360 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SCN2BO60939 215 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PCDH8O95206 1070 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 EGFP01133 1207 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FUCA1P04066 466 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PGRP06401 933 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 HOXC4P09017 264 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 C1GALT1C1LP0DN25 315 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PIM1P11309 404 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 KELP23276 732 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 HRH2P25021 359 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 TACR1P25103 407 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PTPN6P29350 595 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 HSD17B2P37059 387 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 GZMMP51124 257 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SEC13P55735 322 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 TBPL1P62380 186 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 RPS21P63220 83 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 MRPS21P82921 87 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SELPLGQ14242 412 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 INPP5AQ14642 412 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 ARHGAP19Q14CB8 494 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 TRIP10Q15642 601 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CYP2A13Q16696 494 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FAM174BQ3ZCQ3 159 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 RUNDC3AQ59EK9 446 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 ATG9BQ674R7 924 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CAPRIN2Q6IMN6 1127 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 NOXRED1Q6NXP6 359 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 IRGCQ6NXR0 463 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 LCTLQ6UWM7 567 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 TRMT11Q7Z4G4 463 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 HORMAD1Q86X24 394 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 DCUN1D3Q8IWE4 304 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 ADGRG5Q8IZF4 528 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PLCD3Q8N3E9 789 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 KRTCAP2Q8N6L1 136 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 OR7G3Q8NG95 312 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 DNAJB14Q8TBM8 379 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CHTF18Q8WVB6 975 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 NEIL2Q969S2 332 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 RAD51AP1Q96B01 352 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms