RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RETP07949 1114 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 AP5B1Q2VPB7 878 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 MSANTD2Q6P1R3 559 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 TEX26Q8N6G2 289 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 KBTBD8Q8NFY9 601 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 SLC6A13Q9NSD5 602 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 CCDC59Q9P031 241 aaKnown RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 ERVW-1Q9UQF0 538 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 SCML2Q9UQR0 700 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 GRIP1Q9Y3R0 1128 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 TDRD15B5MCY1 1934 aaKnown RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 AGRPO00253 132 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 BTN3A1O00481 513 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 MRPS14O60783 128 aaKnown RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 CA5AP35218 305 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 RFX2P48378 723 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 ARHGDIAP52565 204 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 PRKCZQ05513 592 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 LETMD1Q6P1Q0 360 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 CFAP52Q8N1V2 620 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 METTL6Q8TCB7 284 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 TADA1Q96BN2 335 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 RPRD1AQ96P16 312 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 AARSD1Q9BTE6 412 aaKnown RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 PDP1Q9P0J1 537 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-202ENST00000348987 DOCK4Q8N1I0 1966 aa18.16■□□□□ 0.5
SCARF1-202ENST00000348987 CAPN1P07384 714 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 CRISP3P54108 245 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 UGT2B15P54855 530 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 SETMARQ53H47 684 aaPredicted RBP18.15■□□□□ 0.5
SCARF1-202ENST00000348987 KIAA1614Q5VZ46 1190 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 HORMAD1Q86X24 394 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 ENTHD1Q8IYW4 607 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 CYP4Z2PQ8N1L4 340 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 OR5H6Q8NGV6 325 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 PIK3R3Q92569 461 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 TMEM45AQ9NWC5 275 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 STMN3Q9NZ72 180 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 A0A0D9SEW6 157 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 RAMP2O60895 175 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 ZNF682O95780 498 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 YES1P07947 543 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 OR1E1P30953 314 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 NRIP1P48552 1158 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 RPP38P78345 283 aaKnown RBP18.15■□□□□ 0.5
SCARF1-202ENST00000348987 TP53BP2Q13625 1128 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 NFE2Q16621 373 aaPredicted RBP18.15■□□□□ 0.5
SCARF1-202ENST00000348987 PARP15Q460N3 678 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 SNX20Q7Z614 316 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 OR52E4Q8NGH9 312 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 SOCS4Q8WXH5 440 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 MAP6Q96JE9 813 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 CEP19Q96LK0 163 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 TRNT1Q96Q11 434 aaKnown RBP18.15■□□□□ 0.5
SCARF1-202ENST00000348987 DHRS9Q9BPW9 319 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 DERL2Q9GZP9 239 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 MMP28Q9H239 520 aa18.15■□□□□ 0.5
SCARF1-202ENST00000348987 NUFIP1Q9UHK0 495 aaKnown RBP18.15■□□□□ 0.5
SCARF1-202ENST00000348987 PCM1Q15154 2024 aa18.14■□□□□ 0.5
SCARF1-202ENST00000348987 MYO16Q9Y6X6 1858 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 HMX3A6NHT5 357 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 TEX28O15482 410 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 CPNE3O75131 537 aaKnown RBP18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ETV6P41212 452 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 SLC19A1P41440 591 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 CYP4F2P78329 520 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 P3H2Q8IVL5 708 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 CCDC28AQ8IWP9 274 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 FCGR1BQ92637 280 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 SLC30A2Q9BRI3 323 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF717Q9BY31 904 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-202ENST00000348987 SYTL2Q9HCH5 934 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 KRT84Q9NSB2 600 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ACOXLQ9NUZ1 547 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 MED16Q9Y2X0 877 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 IGLV3-10A0A075B6K4 115 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 hCG_2039718K7EN88 272 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 IFRD1O00458 451 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-202ENST00000348987 E2F3O00716 465 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 MYCLP1P12525 358 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-202ENST00000348987 TYMPP19971 482 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 AKT1P31749 480 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 OR3A3P47888 321 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ARPP19P56211 112 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 SERINC3Q13530 473 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 RUNDC3AQ59EK9 446 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 SPANXN4Q5MJ08 99 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ARMC4Q5T2S8 1044 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 OR2T5Q6IEZ7 315 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 MRNIPQ6NTE8 343 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF598Q86UK7 904 aaKnown RBP18.14■□□□□ 0.49
SCARF1-202ENST00000348987 ATG16L2Q8NAA4 619 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 OR2T29Q8NH02 315 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 GABARAPL1Q9H0R8 117 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 KIF17Q9P2E2 1029 aa18.14■□□□□ 0.49
SCARF1-202ENST00000348987 C12orf71A8MTZ7 269 aa18.13■□□□□ 0.49
SCARF1-202ENST00000348987 VIPP01282 170 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms