RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 BTN3A1O00481 513 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 WNT9AO14904 365 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 RGS14O43566 566 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 DPM1O60762 260 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 WDR47O94967 919 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 ALX3O95076 343 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 LATS1O95835 1130 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 RPLP0P05388 317 aaKnown RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 ACRP10323 421 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 CXCR2P25025 360 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 PRDX3P30048 256 aaKnown RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 SLC11A2P49281 568 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 EPHB3P54753 998 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 OLR1P78380 273 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 DSC2Q02487 901 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 DMPKQ09013 629 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 LAPTM5Q13571 262 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 AP5B1Q2VPB7 878 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 PARP15Q460N3 678 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 CACHD1Q5VU97 1274 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 OR2T5Q6IEZ7 315 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 IL27RAQ6UWB1 636 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 ZDHHC21Q8IVQ6 265 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 CHPFQ8IZ52 775 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 PARP16Q8N5Y8 322 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 CDYL2Q8N8U2 506 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 TTC29Q8NA56 475 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 OR2T29Q8NH02 315 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 PHOSPHO2Q8TCD6 241 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 SH3RF2Q8TEC5 729 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 PSMG2Q969U7 264 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 RMDN1Q96DB5 314 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 FAM120BQ96EK7 910 aaKnown RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 ACOX2Q99424 681 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 ZBP1Q9H171 429 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 NLE1Q9NVX2 485 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 CD274Q9NZQ7 290 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 GALPQ9UBC7 116 aa15.45■□□□□ 0.06
HMGA1-202ENST00000347617 TRMT6Q9UJA5 497 aaKnown RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 WBP11Q9Y2W2 641 aaKnown RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 POLR3HQ9Y535 204 aaPredicted RBP15.45■□□□□ 0.06
HMGA1-202ENST00000347617 TRBV5-3A0A0A0MS03 114 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NPEPPSL1A6NEC2 478 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NDUFB5O43674 189 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 ACSL4O60488 711 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NDUFS3O75489 264 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 ARHGEF15O94989 841 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 OTCP00480 354 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SERPINA1P01009 418 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 LINC00271P0C7V0 271 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PFKLP17858 780 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SOX6P35712 828 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 DGKQP52824 942 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 IL10RBQ08334 325 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 ABHD18Q0P651 414 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 GBX1Q14549 363 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CDK10Q15131 360 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 TAF12Q16514 161 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 RTL10Q7L3V2 364 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 UBQLNLQ8IYU4 475 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NAT16Q8N8M0 369 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 FLCNQ8NFG4 579 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 OR6F1Q8NGZ6 308 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 ARRDC2Q8TBH0 407 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 DPY30Q9C005 99 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 C6orf62Q9GZU0 229 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 MPP6Q9NZW5 540 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PRKAG2Q9UGJ0 569 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 MAN2B2Q9Y2E5 1009 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PCDHGB6Q9Y5F9 930 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 IRAK3Q9Y616 596 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 AP1M2Q9Y6Q5 423 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 A0A096LPI6 279 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 UBA6A0AVT1 1052 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 GOLGA8CPA6NN73 597 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CENPXA8MT69 81 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 E9PQ18 207 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CDC7O00311 574 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PRRG1O14668 218 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 FGF18O76093 207 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CCNDBP1O95273 360 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 TACR2P21452 398 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PRKACGP22612 351 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 TIE1P35590 1138 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SEPHS1P49903 392 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 OR2B6P58173 313 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 GNG2P59768 71 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 ERVPABLB-1P60509 514 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 IL2P60568 153 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 FPGSQ05932 587 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 TTLL9Q3SXZ7 439 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SETMARQ53H47 684 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SPANXN2Q5MJ10 180 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 LRIF1Q5T3J3 769 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 PSRC1Q6PGN9 363 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SCIMPQ6UWF3 145 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 MSANTD1Q6ZTZ1 278 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 GDPD3Q7L5L3 318 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms