RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 KATNA1O75449 491 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 HSPA4LO95757 839 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 PROS1P07225 676 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 UGT2B7P16662 529 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 ALDH4A1P30038 563 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 GRK6P43250 576 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 LSSP48449 732 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 SEC24CP53992 1094 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 LCP2Q13094 533 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 AASDHQ4L235 1098 aaPredicted RBP18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 CATSPEREQ5SY80 951 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 LETMD1Q6P1Q0 360 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 EFL1Q7Z2Z2 1120 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 CUZD1Q86UP6 607 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 ZNF781Q8N8C0 355 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 OR4F6Q8NGB9 312 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 KCNA7Q96RP8 456 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 MID1IP1Q9NPA3 183 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 EVA1BQ9NVM1 165 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 PNPOQ9NVS9 261 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 THAP1Q9NVV9 213 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 KCNK4Q9NYG8 393 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 KLHL20Q9Y2M5 609 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 RNF11Q9Y3C5 154 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 PCDHB11Q9Y5F2 797 aa18.32■□□□□ 0.52
CHMP4A-201ENST00000347519 IGHV1OR21-1A0A087WYE8 117 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 IGKV1-8A0A0C4DH67 115 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 GSAPA4D1B5 854 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 TMEM233B4DJY2 109 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 FLRT2O43155 660 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 NRP2O60462 931 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 OR4F21O95013 312 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CKMT1AP12532 417 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CDH1P12830 882 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 AMD1P17707 334 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CD22P20273 847 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CCND1P24385 295 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 VARSP26640 1264 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 SERPINB5P36952 375 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CCNG1P51959 295 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 FOXA1P55317 472 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CFHR1Q03591 330 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 KIAA1614Q5VZ46 1190 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 ICE2Q659A1 982 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 SLCO4C1Q6ZQN7 724 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 OOSP2Q86WS3 158 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 AGR3Q8TD06 166 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 RHBDD1Q8TEB9 315 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 SLC5A11Q8WWX8 675 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 CNDP2Q96KP4 475 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 ZNF382Q96SR6 550 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 TRMOQ9BU70 441 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 ABCG4Q9H172 646 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 SPNS1Q9H2V7 528 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 SLC6A20Q9NP91 592 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 DYRK1BQ9Y463 629 aa18.31■□□□□ 0.52
CHMP4A-201ENST00000347519 EDF1O60869 148 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 MLYCDO95822 493 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 PIK3CGP48736 1102 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 EPHA4P54764 986 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 PRDX1Q06830 199 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 GALNT1Q10472 559 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CHIT1Q13231 466 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 SLC14A1Q13336 389 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 DOC2AQ14183 400 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 KIR2DS3Q14952 304 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CGB2Q6NT52 195 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 GPRIN3Q6ZVF9 776 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 SPRED1Q7Z699 444 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 TMPRSS11BQ86T26 416 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 OR2L3Q8NG85 312 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 ATP6V1E2Q96A05 226 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 HAUS8Q9BT25 410 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 NTMT1Q9BV86 223 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 FGFR1OP2Q9NVK5 253 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 GPRC5BQ9NZH0 403 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 HAO1Q9UJM8 370 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 RAP2CQ9Y3L5 183 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 KCNE2Q9Y6J6 123 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 KCNE1BA0A087WTH5 132 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 WFS1O76024 890 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 LDOC1O95751 146 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CD1CP29017 333 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 SERPINB3P29508 390 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CSF2RBP32927 897 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 GPR3P46089 330 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CAPZBP47756 277 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 GFERP55789 205 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 NAA20P61599 178 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 DAB2P98082 770 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 MEF2AQ02078 507 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 PCDH1Q08174 1060 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 SF1Q15637 639 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 AMZ1Q400G9 498 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 TCHHL1Q5QJ38 904 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 CLEC6AQ6EIG7 209 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 NXPE4Q6UWF7 544 aa18.3■□□□□ 0.52
CHMP4A-201ENST00000347519 MILR1Q7Z6M3 343 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms