RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TBX1O43435 398 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ITIH1P19827 911 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 EDNRAP25101 427 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CDKN1CP49918 316 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 EGFLAMQ63HQ2 1017 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CLEC4CQ8WTT0 213 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 TBX5Q99593 518 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 GORASP1Q9BQQ3 440 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF717Q9BY31 904 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FLRT1Q9NZU1 646 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 UTS2RQ9UKP6 389 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 SLC45A1Q9Y2W3 748 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ADH1BP00325 375 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 HLA-DQB2P05538 268 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ACSL1P33121 698 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CRHR2Q13324 411 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 GHDCQ8N2G8 530 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 NIPA2Q8N8Q9 360 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 GAL3ST1Q99999 423 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 LRRC3Q9BY71 257 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FETUBQ9UGM5 382 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 NOCTQ9UK39 431 aaKnown RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF670-ZNF695F2Z2N8 137 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 CDH1P12830 882 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 APLP1P51693 650 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 AKR1D1P51857 326 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TAS2R39P59534 338 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SOWAHAQ2M3V2 549 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 GXYLT1Q4G148 440 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 RALGPS1Q5JS13 557 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SPERTQ8NA61 448 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 GEMIN6Q8WXD5 167 aaKnown RBP22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SMPDL3AQ92484 453 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 AIFM2Q9BRQ8 373 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 YIPF4Q9BSR8 244 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 C12orf4Q9NQ89 552 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 CENPMQ9NSP4 180 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 H0YJX3 145 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 INPPL1O15357 1258 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 NOBOXO60393 691 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TGFB1P01137 390 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 CLCNKAP51800 687 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF41P51814 821 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-201ENST00000346562 KLHL6Q8WZ60 621 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 RELTQ969Z4 430 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 ESAMQ96AP7 390 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TMLHEQ9NVH6 421 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 GMEB1Q9Y692 573 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 A0A0G2JN53 185 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 C5orf51A6NDU8 294 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 UPK3BL1B0FP48 263 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 UPK3BL2E5RIL1 263 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 NUAK1O60285 661 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 CSTBP04080 98 aaKnown RBP22.55■■□□□ 1.2
NPAS3-201ENST00000346562 CHRNA4P43681 627 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TMCO6Q96DC7 493 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 ERMAPQ96PL5 475 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-201ENST00000346562 FBXL12Q9NXK8 326 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TAC3Q9UHF0 121 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 ALPIP09923 528 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 MYLK3Q32MK0 819 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SLC29A3Q9BZD2 475 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TLR9Q9NR96 1032 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 GLS2Q9UI32 602 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 A0A1W2PRQ8 180 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TRAPPC6AO75865 159 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 RCBTB2O95199 551 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SCNN1AP37088 669 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 SEMG2Q02383 582 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 OR2AP1Q8NGE2 309 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 C15orf40Q8WUR7 153 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 TMEM125Q96AQ2 219 aa22.55■■□□□ 1.2
NPAS3-201ENST00000346562 FAM163BP0C2L3 166 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 AZGP1P25311 298 aaKnown RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 RPS24P62847 133 aaKnown RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 B3GALT6Q96L58 329 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 TMEM209Q96SK2 561 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 RIMKLBQ9ULI2 386 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 KIAA1161Q6NSJ0 714 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 OR52E4Q8NGH9 312 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 SETD7Q8WTS6 366 aaKnown RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 AASSQ9UDR5 926 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 BDKRB1P46663 353 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 BNIP1Q12981 228 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 LNX2Q8N448 690 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 TMED5Q9Y3A6 229 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 TLR4O00206 839 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 HADHBP55084 474 aaKnown RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 MTTPP55157 894 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 SIRPB2Q5JXA9 342 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 UBE2J2Q8N2K1 259 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 KIAA1143Q96AT1 154 aaPredicted RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 COL21A1Q96P44 957 aa22.54■■□□□ 1.2
NPAS3-201ENST00000346562 C12orf65Q9H3J6 166 aaKnown RBP22.54■■□□□ 1.2
NPAS3-201ENST00000346562 PEX10O60683 326 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 CHRNB2P17787 502 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 PRAMEF17Q5VTA0 474 aa22.53■■□□□ 1.2
NPAS3-201ENST00000346562 THOC6Q86W42 341 aaKnown RBP22.53■■□□□ 1.2
NPAS3-201ENST00000346562 YIPF7Q8N8F6 280 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms