RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 G3BP2Q9UN86 482 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 MAN2B2Q9Y2E5 1009 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 HEMK1Q9Y5R4 338 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CELSR3Q9NYQ7 3312 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 ITPR1Q14643 2758 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 TXNDC9O14530 226 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 TERTO14746 1132 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 FAM87AP0C7U9 286 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 GABRA4P48169 554 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 AP1S2P56377 157 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 PRDX1Q06830 199 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 FASTKQ14296 549 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 LINC00303Q3SY05 128 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 MLIPQ5VWP3 458 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 ICE2Q659A1 982 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 FCRL6Q6DN72 434 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 ZNF517Q6ZMY9 492 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 C3orf62Q6ZUJ4 267 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 RAB43Q86YS6 212 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 ENDOVQ8N8Q3 282 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 ZNF480Q8WV37 535 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 TSPAN17Q96FV3 270 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 TSPYL1Q9H0U9 437 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 RHOJQ9H4E5 214 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 GEMIN8Q9NWZ8 242 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 ARL15Q9NXU5 204 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 MTRF1LQ9UGC7 380 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 KLK4Q9Y5K2 254 aa15.13■□□□□ 0.01
TSPAN4-201ENST00000346501 A0A0J9YVX5 310 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 FAM95CA0A1B0GW59 222 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 A0A1B0GX78 115 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 A0A1W2PPV9 198 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CTAGE15A4D2H0 777 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 KRT87PA6NCN2 255 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 E7ENX8 843 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 MKRN2OSH3BPM6 223 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 TP73O15350 636 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 EIF2S1P05198 315 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 ENO2P09104 434 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CTAGE8P0CG41 777 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 FDXRP22570 491 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 STX2P32856 288 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 POLE2P56282 527 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 VSX2P58304 361 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 TAP2Q03519 686 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 KCNAB2Q13303 367 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 NCF4Q15080 339 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 UGT8Q16880 541 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 NKAIN1Q4KMZ8 207 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 C1orf189Q5VU69 101 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 TTLL10Q6ZVT0 673 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CYS1Q717R9 158 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CTAGE6Q86UF2 777 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 ZC3HC1Q86WB0 502 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CTAGE4Q8IX94 777 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CTAGE3PQ8IX95 158 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 PPFIBP2Q8ND30 876 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 FBXO25Q8TCJ0 367 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 IP6K3Q96PC2 410 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CPNE1Q99829 537 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 PLCD4Q9BRC7 762 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 WDR83Q9BRX9 315 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 FAM129AQ9BZQ8 928 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 AKIRIN1Q9H9L7 192 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 CUTCQ9NTM9 273 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 GRHL1Q9NZI5 618 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 SLC17A6Q9P2U8 582 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 DHCR7Q9UBM7 475 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 TCFL5Q9UL49 500 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 PDE10AQ9Y233 779 aa15.12■□□□□ 0.01
TSPAN4-201ENST00000346501 LAMA5O15230 3695 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 OR2A25A4D2G3 310 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PRPF4O43172 522 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■■■□ 20.9
TSPAN4-201ENST00000346501 IGHEP01854 428 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PRB1P04280 392 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 EZRP15311 586 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 IMPA1P29218 277 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 SSTR1P30872 391 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 GRK3P35626 688 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 FOLR3P41439 243 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 RPS18P62269 152 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 POU4F1Q01851 419 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 MUM1Q2TAK8 710 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 WASHC2DQ5SRD0 308 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PRAMEF13Q5VWM6 474 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 CAPN13Q6MZZ7 669 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PCSK4Q6UW60 755 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 ZNF605Q86T29 641 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 C17orf64Q86WR6 236 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 TBC1D19Q8N5T2 526 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 ALKBH8Q96BT7 664 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PDLIM5Q96HC4 596 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 VPS50Q96JG6 964 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 HAUS8Q9BT25 410 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 SLC25A18Q9H1K4 315 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 POPDC3Q9HBV1 291 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 STOX2Q9P2F5 926 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 CDC14AQ9UNH5 594 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms