RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 AGAP4Q96P64 663 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 AARSD1Q9BTE6 412 aaKnown RBP15.13■□□□□ 0.01
SRPK1-201ENST00000346162 ERVK-6Q9BXR3 956 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 LRRC3Q9BY71 257 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 IGFLR1Q9H665 355 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 KCNK13Q9HB14 408 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 MED11Q9P086 117 aa15.13■□□□□ 0.01
SRPK1-201ENST00000346162 CAPN14A8MX76 684 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 HPGDP15428 266 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 PPIBP23284 216 aaKnown RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ACVRL1P37023 503 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 TGFBR2P37173 567 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 PPP1R3AQ16821 1122 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ARSKQ6UWY0 536 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 SLC15A3Q8IY34 581 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CRELD1Q96HD1 420 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ZNF599Q96NL3 588 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 XKR8Q9H6D3 395 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CLCA3PQ9Y6N3 262 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 OR14I1A6ND48 311 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 UPK1BO75841 260 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RLN1P04808 185 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 PROZP22891 400 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 PIGGQ5H8A4 983 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 TRIM40Q6P9F5 258 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 SYVN1Q86TM6 617 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 LAPTM4BQ86VI4 370 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ANKFN1Q8N957 763 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 SRFBP1Q8NEF9 429 aaKnown RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CCDC115Q96NT0 180 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 GPN1Q9HCN4 374 aaPredicted RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ANGPT4Q9Y264 503 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 A0A1W2PQ67 120 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 FAM72CH0Y354 149 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RASAL1O95294 804 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CLTBP09497 229 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 GSTM2P28161 218 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 MAP2K4P45985 399 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 KCNAB2Q13303 367 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 NAE1Q13564 534 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 FAM72AQ5TYM5 149 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ANXA8L1Q5VT79 327 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 FAM72DQ6L9T8 149 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RFPL4BQ6ZWI9 263 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 FAM72BQ86X60 149 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CD93Q9NPY3 652 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 NUFIP1Q9UHK0 495 aaKnown RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 KHDRBS3O75525 346 aaKnown RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 TRBC1P01850 177 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 PRKACGP22612 351 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 KCNQ1P51787 676 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RPS3AP61247 264 aaKnown RBP15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RAB6CQ53S08 254 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ADGRF1Q5T601 910 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CPTPQ5TA50 214 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CADM3Q8N126 398 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 DPF3Q92784 378 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 ZUFSPQ96AP4 578 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 CTRCQ99895 268 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 RAB6CQ9H0N0 254 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 SCML2Q9UQR0 700 aa15.12■□□□□ 0.01
SRPK1-201ENST00000346162 INMT-MINDY4F8WBC2 141 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 MPZL2O60487 215 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 NIPSNAP2O75323 286 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 BEST1O76090 585 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 FBXO43Q4G163 708 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 PLPP4Q5VZY2 271 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 ZNF597Q96LX8 424 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 FERD3LQ96RJ6 166 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 DPCDQ9BVM2 203 aaPredicted RBP15.11■□□□□ 0.01
SRPK1-201ENST00000346162 SLITRK2Q9H156 845 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 SGK2Q9HBY8 427 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 PCDHB3Q9Y5E6 796 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 hCG_2039718K7EN88 272 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 FABP3P05413 133 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 ITGB1P05556 798 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 ATP13A5Q4VNC0 1218 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 CAPN13Q6MZZ7 669 aaPredicted RBP15.11■□□□□ 0.01
SRPK1-201ENST00000346162 HAGHLQ6PII5 290 aaPredicted RBP15.11■□□□□ 0.01
SRPK1-201ENST00000346162 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 BIRC7Q96CA5 298 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 SLC38A2Q96QD8 506 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 MROQ9BYG7 248 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 POLR2J2Q9GZM3 115 aaKnown RBP15.11■□□□□ 0.01
SRPK1-201ENST00000346162 PCDHB16Q9NRJ7 776 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 INHAP05111 366 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 COL6A1P12109 1028 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 UGT2B15P54855 530 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 FOXM1Q08050 763 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 SPATS1Q496A3 300 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 NANOGP8Q6NSW7 305 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 OR8D1Q8WZ84 308 aa15.11■□□□□ 0.01
SRPK1-201ENST00000346162 ACDQ96AP0 544 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms