RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SUSD1Q6UWL2 747 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 CEACAM20Q6UY09 585 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 D2HGDHQ8N465 521 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 OR2A1Q8NGT9 310 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 OR8K5Q8NH50 307 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 KCTD4Q8WVF5 259 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 ALKBH8Q96BT7 664 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 NXNL1Q96CM4 212 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 TRAPPC9Q96Q05 1148 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 TMEM109Q9BVC6 243 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 CAPS2Q9BXY5 557 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 TWSG1Q9GZX9 223 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 CHRNA10Q9GZZ6 450 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 ATG10Q9H0Y0 220 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 MRPS30Q9NP92 439 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 IGSF5Q9NSI5 407 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 PISDQ9UG56 409 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 SNX7Q9UNH6 387 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 BTRCQ9Y297 605 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 PTPRBP23467 1997 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 ACACAQ13085 2346 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 GOLGA6L10A6NI86 522 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 SUPT3HB4E1H0 165 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 SUPT3HO75486 399 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 RFPL1O75677 317 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 MSL3P1P0C860 447 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 GLRBP48167 497 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 CSRP3P50461 194 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 MAPK10P53779 464 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 ERVPABLB-1P60509 514 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 OR4D1Q15615 310 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 ICE2Q659A1 982 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 FIGLAQ6QHK4 219 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 C17orf64Q86WR6 236 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 CENPLQ8N0S6 344 aaPredicted RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 TBC1D19Q8N5T2 526 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 C19orf47Q8N9M1 422 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 MYRIPQ8NFW9 859 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 OR2L3Q8NG85 312 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 OR56A3Q8NH54 315 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 PTERQ96BW5 349 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 SLC46A1Q96NT5 459 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 FCRL4Q96PJ5 515 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 RUFY1Q96T51 708 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 NRTNQ99748 197 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 MRPL57Q9BQC6 102 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 DDA1Q9BW61 102 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 ACAT2Q9BWD1 397 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 PCMTD2Q9NV79 361 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 WWOXQ9NZC7 414 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 NUDT4Q9NZJ9 180 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 ANKMY1Q9P2S6 941 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 TAC3Q9UHF0 121 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 SERTAD3Q9UJW9 196 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 RARRES3Q9UL19 164 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 TNPO3Q9Y5L0 923 aaKnown RBP11.4□□□□□ -0.58
SNCA-202ENST00000345009 KCNE2Q9Y6J6 123 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 AHCTF1Q8WYP5 2266 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 CHD8Q9HCK8 2581 aa11.4□□□□□ -0.58
SNCA-202ENST00000345009 KIF26BQ2KJY2 2108 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 KRT87PA6NCN2 255 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 NCF1BA6NI72 391 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 NCF1CA8MVU1 366 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 AGRPO00253 132 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 NVLO15381 856 aaKnown RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 PRICKLE3O43900 615 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 SMIM24O75264 130 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 FGF3P11487 239 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 CCL4P13236 92 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 GFAPP14136 432 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 NCF1P14598 390 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 ST6GAL1P15907 406 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 TAC1P20366 129 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 CD82P27701 267 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 GRK3P35626 688 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 TBPL1P62380 186 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 IRF9Q00978 393 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 TUBB3Q13509 450 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 KRT71Q3SY84 523 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PRAMEF13Q5VWM6 474 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 LCTLQ6UWM7 567 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 MBOAT1Q6ZNC8 495 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 ADCK2Q7Z695 626 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 TRIM73Q86UV7 250 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PPP1R3BQ86XI6 285 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 MARCH9Q86YJ5 346 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 LRRC56Q8IYG6 542 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 GPR135Q8IZ08 494 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PPFIBP2Q8ND30 876 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 OR2W6PQ8NHA6 318 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 EXT2Q93063 718 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms