RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CDC14AQ9UNH5 594 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SLC35F4A4IF30 521 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 FOXK1P85037 733 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 METTL7BQ6UX53 244 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CADM1Q9BY67 442 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CYCSP99999 105 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ZBTB2Q8N680 514 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 GCDHQ92947 438 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 PEX13Q92968 403 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 POTEKPQ9BYX7 375 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 VWA7Q9Y334 891 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CKAP5Q14008 2032 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ANKRD34BA5PLL1 514 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 OR1F1O43749 312 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ASB6Q9NWX5 421 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 SLC7A8Q9UHI5 535 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 F5H0A9 414 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 TREHO43280 583 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ERVK-24P63145 666 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CHIT1Q13231 466 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 DPY19L3Q6ZPD9 716 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 PXKQ7Z7A4 578 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 FBXO15Q8NCQ5 510 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 BCAS3Q9H6U6 928 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 AGO4Q9HCK5 861 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CNOT11Q9UKZ1 510 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 BACE2Q9Y5Z0 518 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CASC3O15234 703 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 TRUB2O95900 331 aaKnown RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 RAP2AP10114 183 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 PRPS2P11908 318 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 SLC5A3P53794 718 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 KCNJ2P63252 427 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CACNG1Q06432 222 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 SIM2Q14190 667 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF169Q14929 603 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ZPBP2Q6X784 338 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
SMAD4-201ENST00000342988 ANKK1Q8NFD2 765 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 TWIST2Q8WVJ9 160 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 MSCO60682 206 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 PCCBP05166 539 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 HERVK_113P62684 666 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 STYXQ8WUJ0 223 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 A0A0G2JN53 185 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 LRRC72A6NJI9 287 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 CYP11A1P05108 521 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 PLA2G4EQ3MJ16 856 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 SEZ6Q53EL9 994 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 DEFB106AQ8N104 65 aa17.25■□□□□ 0.35
SMAD4-201ENST00000342988 EPHB6O15197 1021 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 THEM6Q8WUY1 208 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 SMCO4Q9NRQ5 59 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 ASPAP45381 313 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 PRKXP51817 358 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 GPR157Q5UAW9 335 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 RALGPS2Q86X27 583 aaPredicted RBP17.24■□□□□ 0.35
SMAD4-201ENST00000342988 FBXO16Q8IX29 292 aaPredicted RBP17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 CENPMQ9NSP4 180 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 FBXW2Q9UKT8 454 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 D6RAR5 112 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 PEX12O00623 359 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 HOXA9P31269 272 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 MADCAM1Q13477 382 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A9O60656 530 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TRAPPC6AO75865 159 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A6P19224 532 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A1P22309 533 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A4P22310 534 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TSPAN33Q86UF1 283 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 RASGEF1CQ8N431 466 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TAS1R2Q8TE23 839 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A7Q9HAW7 530 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A10Q9HAW8 530 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UGT1A8Q9HAW9 530 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 MRPS30Q9NP92 439 aaKnown RBP17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TMPRSS4Q9NRS4 437 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 NLGN3Q9NZ94 848 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 UAP1L1Q3KQV9 507 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 RDH10Q8IZV5 341 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 MYRFLQ96LU7 910 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 GFOD1Q9NXC2 390 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 TFR2Q9UP52 801 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 SEMA3AQ14563 771 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 SLC1A5Q15758 541 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 NOXRED1Q6NXP6 359 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 GLYATL2Q8WU03 294 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 LCN9Q8WX39 176 aa17.24■□□□□ 0.35
SMAD4-201ENST00000342988 DAZAP1Q96EP5 407 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms